G1575705


Basic Information

Item Value
gene id G1575705
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 66685211 ~ 66688975 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1802891
CCACACAGGAATACCATATGCGTACGTATGTATGAGCAAGATAATACATATATCATAATAATCATTTTACACAATGTCAATATTGTGCATATCCTCGTTTTGTATACACATCACTGGCATCATTGTTGTATTCCGACTACACAGAGCTCGCTATACattatacatattatacattacatacagaatactgaCAAACACATGCACAGATGTGCACCGTAAAGGATCTGACACGAGGACTGCGTGGTACAAGGTTCTCGTTATAATGCGTACATTGGAGCTTCGTAAGCACTACTCAAGACATTCAGAATTGCTTTACGACACGACAACTCATATCACAGTCATTAACAAGCTGGGCTACTGTACCACACTAGAGTCTAGAGAGTTCCAAAGGTCAAGCAAGGCCATGGCATTCTGGGGCCTTGAGAAAGGTTGAAGGTCACACAAGCACTAACCCATTTGCCATAAGAGTTGATGAATACGGAAGAGGTGCTCATGAGGGTACACTCCATGTTACATTACGTGGGTCGTGGGTTGTGGGTCAGGGAGGTGGGTCGTGGGTTGTGGGTTAGGGGCGTGGGTCGTTAAAAGTCCAAGGGCTTCATTCAACCTGTAGCGCGGATGAGCTACTTTGTAGCGCGGAAGAGATGTAAAGATGATTTCTGAATGAGCAGACAGAtacagcgtttaccgtgaattcAGTCACCACAAACGCAGAAACATTTCCATTAAATGTCAATCACGCTATAACGCTGATCTTATCAACCCCTGATTGAATCAAAGCCCCAAAATGAAAAATCGGGATAAAAAGATTAGCTTAATAAAAGAGTAGAGGTCACAGAACTGAAAGGTACTGAGCTGGTCCAGAGAGGGAGATGTGCCCCAGACCTGTCTAAATCAACATCCTCCCTACGGGTAGAGGTTACAGAACTGACTCCAGACCTGTCTAAATCAACATCCTCCCGACGGGTAGAGGTTACAGAACTGACTCCAGACCTGTCTAAATCAACATCctccatacaggtagaggttACAGAACTGACTCCAGACCTGTCTAAATCAACATCCTCCCTACGGGTAGAGGTTACAGAACTGACTCCAGACCTGTCTAAATCAACATCCTCCCTACAGGTAGAGGTTACAGAACTGACTCCAGACCTGTCTAAATCAACATCCTCCCTACAGGTAGAGGTTACAGAACTGACTCCACACTTGTCTAAATCAACATCCTCCCTACGGGTAGAGGTTACAGAACTGACTCCAGACCAGTCTAATTCAACATCCTCCCTAGAGGTTACAGAACTGCATAGGGGGCCATTTCAGCTATTGCATTTCTCAACATCACAAAGCTGATCATCTGACAGAGGCGGGGTACTCTGGAATTATGTTAAGTATCCGAGGAAGGGgtattttctgtctgtctctaaaaAGTACAgcgcttttaaaaaaaaaaagtccttCCTCCTTGACATTGCTTCACAAGGCAAACATGAAACCGTGGAGCAGAAGCAACCGACAAAACAGGGAATTACTGCTGAATGGAGGGGAGATTCTTTTTTACAGCCACGTGTTTGTTTGAGTAGTTTACAATTTGCTAAAGAGGAGAGCCTCCCCCTCTTAAAGTGTCACTGAGGAATCAACTGGATCTTCAGATGGGGTGATTCAACTTTGTCCCAAAATAGCAGAAACCCTATGTAGTGTACTTGAGCAACAATGGACCCTGGtgcacactacatagggaatagtgcacactatgtagggaatagtgcacactacatagggaatagtgcacactacatagggaatagggtaccatttgggatgcatgcaaCCTAAAGCTTTTAGCCGGCGAGAAGGTGagataaaattttaaaaaagatGAATGATAATAATCCAAAATCAATGACAAATGTGTGTATGAGCTTGTGAGGCTTGTGCACTATGACAAGTACTACTTCCTCCGACTTCTAACTAAACGGTTCAGAGCCCAAACTTCATGTTCAGAAGAGCTATAAAAGTATGATTCCGTTTCACCGTTGGTTGTATTATACTGTAACTCACTCATCCTATTATGTGTTTGACCTGTTTTATAGAGTTGTAAAACTCCCAGGTTTTCCACCAATCACACGGGTGTGTTTTCTGACATATTTCTTTCTGATTCCTcgggaatcttccaaccagggTTTGTGGAAAACCTGGGAATCTTGGGGAAAGTTAGCAGATTTGTACGACCCTAACTAACCTGTTATCTTCAGCTATATTCCCATTCGGCTTGTATTTTGGACAACACTTTCTGTCTGCCTTATCTGCTTAGAAGTCTCTTCCGGGCAAACAGCTGTGGACTGGCATTACCACCACTGTTTCAGTGTTGATCAGCTTTATGAAATAAAGGCACTACTTCCCTTTACTGCAATCAGGACAACTTAACTACTTTATAGCGGAGGCCTGAACCTACTGTAACACTGCATCTGCATTGAACCTACTGTAACACTGCATCTGCATTGAACCTACTGTAACACAGCTTCTGCCACCCAGAAACAGATTATTCTGCAGCTGGAATACATCCCAATAATCAGCACACAccaggtagatagatagatagagagagagagagagagagagagagagagagagagagagagagatagagagagagagagagagagagagagagagagagagagagagagagagagagagagacagagagcgcgagagagagagagagagacagagagagagacagagagagagagagagagagatagagagagagagagagagagagatagagagatagagagagagagagagagatagagagagagagagagcgagagagagagagcgagagagagaaggagagagagacagagagagagaaagagagagacagagagagagagagagagagagagagagagagagagagagatagagagagatagagatagagagagagagagagagagagagacagagagagacagagagatagatagagagagagagagacatagcgagacagagagagagagagagagagagatagagagatagatagagagagagagagagagagagagagagagagagagacagagagcgagagagagagagagagacagagagagacagagagatagatagagatagagagagagagagagagagagagagagagatagagagatagagagatagagagagagagagagacagagagcgagcgagagagagagagagacagagagagagagaaagagagagacagagagagagagagagagagagagagagagagagagatatatatatagagagagagagagagagagagatagagagagagagagagaccctggcatgagggtctgctatacaaactgatggaaagtggtgttgggtggtgttgggggtaaaacatacgacattataaaatccatgtacacaaacaacaagtgtgcggttaaaattggcaaaaaacacacacatttcttcacacagggtcgtggggttagacagggatgcagtttaagccccaccctcttcaacatatatatcaacgaattggcgcgggcactagaaaagtctgcagcacccggc
>TU1802892
CCACACAGGAATACCATATGCGTACGTATGTATGAGCAAGATAATACATATATCATAATAATCATTTTACACAATGTCAATATTGTGCATATCCTCGTTTTGTATACACATCACTGGCATCATTGTTGTATTCCGACTACACAGAGCTCGCTATACattatacatattatacattacatacagaatactgaCAAACACATGCACAGATGTGCACCGTAAAGGATCTGACACGAGGACTGCGTGGTACAAGGTTCTCGTTATAATGCGTACATTGGAGCTTCGTAAGCACTACTCAAGACATTCAGAATTGCTTTACGACACGACAACTCATATCACAGTCATTAACAAGCTGGGCTACTGTACCACACTAGAGTCTAGAGAGTTCCAAAGGTCAAGCAAGGCCATGGCATTCTGGGGCCTTGAGAAAGGTTGAAGGTCACACAAGCACTAACCCATTTGCCATAAGAGTTGATGAATACGGAAGAGGTGCTCATGAGGGTACACTCCATGTTACATTACGTGGGTCGTGGGTTGTGGGTCAGGGAGGTGGGTCGTGGGTTGTGGGTTAGGGGCGTGGGTCGTTAAAAGTCCAAGGGCTTCATTCAACCTGTAGCGCGGATGAGCTACTTTGTAGCGCGGAAGAGATGTAAAGATGATTTCTGAATGAGCAGACAGAtacagcgtttaccgtgaattcAGTCACCACAAACGCAGAAACATTTCCATTAAATGTCAATCACGCTATAACGCTGATCTTATCAACCCCTGATTGAATCAAAGCCCCAAAATGAAAAATCGGGATAAAAAGATTAGCTTAATAAAAGAGTAGAGGTCACAGAACTGAAAGGTACTGAGCTGGTCCAGAGAGGGAGATGTGCCCCAGACCTGTCTAAATCAACATCCTCCCTACGGGTAGAGGTTACAGAACTGACTCCAGACCTGTCTAAATCAACATCCTCCCGACGGGTAGAGGTTACAGAACTGACTCCAGACCTGTCTAAATCAACATCCTCCCGACGGGTAGAGGTTACAGAACTGACTCCAGACCTGTCTAAATCAACATCCTTCCTACAGGTAGAGGTTACAGAACTAACTCCAGACCTGTCTAAATCAACATCCTTCCTACAGGTAGAGGTTACAGAACTGACTCCACACTTGTCTAAATCAACATCCTCCCTACGGGTAGAGGTTACAGAACTGACTCCAGACCAGTCTAATTCAACATCCTCCCTAGAGGTTACAGAACTGCATAGGGGGCCATTTCAGCTATTGCATTTCTCAACATCACAAAGCTGATCATCTGACAGAGGCGGGGTACTCTGGAATTATGTTAAGTATCCGAGGAAGGGgtattttctgtctgtctctaaaaAGTACAgcgcttttaaaaaaaaaaagtccttCCTCCTTGACATTGCTTCACAAGGCAAACATGAAACCGTGGAGCAGAAGCAACCGACAAAACAGGGAATTACTGCTGAATGGAGGGGAGATTCTTTTTTACAGCCACGTGTTTGTTTGAGTAGTTTACAATTTGCTAAAGAGGAGAGCCTCCCCCTCTTAAAGTGTCACTGAGGAATCAACTGGATCTTCAGATGGGGTGATTCAACTTTGTCCCAAAATAGCAGAAACCCTATGTAGTGTACTTGAGCAACAATGGACCCTGGtgcacactacatagggaatagtgcacactatgtagggaatagtgcacactacatagggaatagtgcacactacatagggaatagggtaccatttgggatgcatgcaaCCTAAAGCTTTTAGCCGGCGAGAAGGTGagataaaattttaaaaaagatGAATGATAATAATCCAAAATCAATGACAAATGTGTGTATGAGCTTGTGAGGCTTGTGCACTATGACAAGTACTACTTCCTCCGACTTCTAACTAAACGGTTCAGAGCCCAAACTTCATGTTCAGAAGAGCTATAAAAGTATGATTCCGTTTCACCGTTGGTTGTATTATACTGTAACTCACTCATCCTATTATGTGTTTGACCTGTTTTATAGAGTTGTAAAACTCCCAGGTTTTCCACCAATCACACGGGTGTGTTTTCTGACATATTTCTTTCTGATTCCTcgggaatcttccaaccagggTTTGTGGAAAACCTGGGAATCTTGGGGAAAGTTAGCAGATTTGTACGACCCTAACTAACCTGTTATCTTCAGCTATATTCCCATTCGGCTTGTATTTTGGACAACACTTTCTGTCTGCCTTATCTGCTTAGAAGTCTCTTCCGGGCAAACAGCTGTGGACTGGCATTACCACCACTGTTTCAGTGTTGATCAGCTTTATGAAATAAAGGCACTACTTCCCTTTACTGCAATCAGGACAACTTAACTACTTTATAGCGGAGGCCTGAACCTACTGTAACACTGCATCTGCATTGAACCTACTGTAACACTGCATCTGCATTGAACCTACTGTAACACAGCTTCTGCCACCCAGAAACAGATTATTCTGCAGCTGGAATACATCCCAATAATCAGCACACAccaggtagatagatagatagagagagagagagagagagagagagagagagagagagagagagatagagagagagagagagagagagagagagagagagagagagagagagagagagagagacagagagcgcgagagagagagagagagacagagagagagacagagagagagagagagagagatagagagagagagagagagagagatagagagatagagagagagagagagagatagagagagagagagagcgagagagagagagcgagagagagaaggagagagagacagagagagagaaagagagagacagagagagagagagagagagagagagagagagagagagagatagagagagatagagatagagagagagagagagagagagagacagagagagacagagagatagatagagagagagagagacatagcgagacagagagagagagagagagagagatagagagatagatagagagagagagagagagagagagagagagagagagacagagagcgagagagagagagagagacagagagagacagagagatagatagagatagagagagagagagagagagagagagagagatagagagatagagagatagagagagagagagagacagagagcgagcgagagagagagagagacagagagagagagaaagagagagacagagagagagagagagagagagagagagagagagagatatatatatagagagagagagagagagagagatagagagagagagagagaccctggcatgagggtctgctatacaaactgatggaaagtggtgttgggtggtgttgggggtaaaacatacgacattataaaatccatgtacacaaacaacaagtgtgcggttaaaattggcaaaaaacacacacatttcttcacacagggtcgtggggttagacagggatgcagtttaagccccaccctcttcaacatatatatcaacgaattggcgcgggcactagaaaagtctgcagcacccggc
>TU1802893
CCACACAGGAATACCATATGCGTACGTATGTATGAGCAAGATAATACATATATCATAATAATCATTTTACACAATGTCAATATTGTGCATATCCTCGTTTTGTATACACATCACTGGCATCATTGTTGTATTCCGACTACACAGAGCTCGCTATACattatacatattatacattacatacagaatactgaCAAACACATGCACAGATGTGCACCGTAAAGGATCTGACACGAGGACTGCGTGGTACAAGGTTCTCGTTATAATGCGTACATTGGAGCTTCGTAAGCACTACTCAAGACATTCAGAATTGCTTTACGACACGACAACTCATATCACAGTCATTAACAAGCTGGGCTACTGTACCACACTAGAGTCTAGAGAGTTCCAAAGGTCAAGCAAGGCCATGGCATTCTGGGGCCTTGAGAAAGGTTGAAGGTCACACAAGCACTAACCCATTTGCCATAAGAGTTGATGAATACGGAAGAGGTGCTCATGAGGGTACACTCCATGTTACATTACGTGGGTCGTGGGTTGTGGGTCAGGGAGGTGGGTCGTGGGTTGTGGGTTAGGGGCGTGGGTCGTTAAAAGTCCAAGGGCTTCATTCAACCTGTAGCGCGGATGAGCTACTTTGTAGCGCGGAAGAGATGTAAAGATGATTTCTGAATGAGCAGACAGAtacagcgtttaccgtgaattcAGTCACCACAAACGCAGAAACATTTCCATTAAATGTCAATCACGCTATAACGCTGATCTTATCAACCCCTGATTGAATCAAAGCCCCAAAATGAAAAATCGGGATAAAAAGATTAGCTTAATAAAAGAGTAGAGGTCACAGAACTGAAAGGTACTGAGCTGGTCCAGAGAGGGAGATGTGCCCCAGACCTGTCTAAATCAACATCCTCCCTACGGGTAGAGGTTACAGAACTGACTCCAGACCTGTCTAAATCAACATCCTCCCGACGGGTAGAGGTTACAGAACTGACTCCAGACCTGTCTAAATCAACATCctccatacaggtagaggttACAGAACTGACTCCAGACCTGTCTAAATCAACATCCTCCCTACGGGTAGAGGTTACAGAACTGACTCCAGACCTGTCTAAATCAACATCCTCCCTACAGGTAGAGGTTACAGAACTGACTCCAGACCTGTCTAAATCAACATCCTCCCGACGGGTAGAGGTTACAGAACTGACTCCAGACCTGTCTAAATCAACATCCTTCCTACAGGTAGAGGTTACAGAACTAACTCCAGACCTGTCTAAATCAACATCCTTCCTACAGGTAGAGGTTACAGAACTGACTCCACACTTGTCTAAATCAACATCCTCCCTACGGGTAGAGGTTACAGAACTGACTCCAGACCAGTCTAATTCAACATCCTCCCTAGAGGTTACAGAACTGCATAGGGGGCCATTTCAGCTATTGCATTTCTCAACATCACAAAGCTGATCATCTGACAGAGGCGGGGTACTCTGGAATTATGTTAAGTATCCGAGGAAGGGgtattttctgtctgtctctaaaaAGTACAgcgcttttaaaaaaaaaaagtccttCCTCCTTGACATTGCTTCACAAGGCAAACATGAAACCGTGGAGCAGAAGCAACCGACAAAACAGGGAATTACTGCTGAATGGAGGGGAGATTCTTTTTTACAGCCACGTGTTTGTTTGAGTAGTTTACAATTTGCTAAAGAGGAGAGCCTCCCCCTCTTAAAGTGTCACTGAGGAATCAACTGGATCTTCAGATGGGGTGATTCAACTTTGTCCCAAAATAGCAGAAACCCTATGTAGTGTACTTGAGCAACAATGGACCCTGGtgcacactacatagggaatagtgcacactatgtagggaatagtgcacactacatagggaatagtgcacactacatagggaatagggtaccatttgggatgcatgcaaCCTAAAGCTTTTAGCCGGCGAGAAGGTGagataaaattttaaaaaagatGAATGATAATAATCCAAAATCAATGACAAATGTGTGTATGAGCTTGTGAGGCTTGTGCACTATGACAAGTACTACTTCCTCCGACTTCTAACTAAACGGTTCAGAGCCCAAACTTCATGTTCAGAAGAGCTATAAAAGTATGATTCCGTTTCACCGTTGGTTGTATTATACTGTAACTCACTCATCCTATTATGTGTTTGACCTGTTTTATAGAGTTGTAAAACTCCCAGGTTTTCCACCAATCACACGGGTGTGTTTTCTGACATATTTCTTTCTGATTCCTcgggaatcttccaaccagggTTTGTGGAAAACCTGGGAATCTTGGGGAAAGTTAGCAGATTTGTACGACCCTAACTAACCTGTTATCTTCAGCTATATTCCCATTCGGCTTGTATTTTGGACAACACTTTCTGTCTGCCTTATCTGCTTAGAAGTCTCTTCCGGGCAAACAGCTGTGGACTGGCATTACCACCACTGTTTCAGTGTTGATCAGCTTTATGAAATAAAGGCACTACTTCCCTTTACTGCAATCAGGACAACTTAACTACTTTATAGCGGAGGCCTGAACCTACTGTAACACTGCATCTGCATTGAACCTACTGTAACACTGCATCTGCATTGAACCTACTGTAACACAGCTTCTGCCACCCAGAAACAGATTATTCTGCAGCTGGAATACATCCCAATAATCAGCACACAccaggtagatagatagatagagagagagagagagagagagagagagagagagagagagagagatagagagagagagagagagagagagagagagagagagagagagagagagagagagagacagagagcgcgagagagagagagagagacagagagagagacagagagagagagagagagagatagagagagagagagagagagagatagagagatagagagagagagagagagatagagagagagagagagcgagagagagagagcgagagagagaaggagagagagacagagagagagaaagagagagacagagagagagagagagagagagagagagagagagagagagatagagagagatagagatagagagagagagagagagagagagacagagagagacagagagatagatagagagagagagagacatagcgagacagagagagagagagagagagagatagagagatagatagagagagagagagagagagagagagagagagagagacagagagcgagagagagagagagagacagagagagacagagagatagatagagatagagagagagagagagagagagagagagagatagagagatagagagatagagagagagagagagacagagagcgagcgagagagagagagagacagagagagagagaaagagagagacagagagagagagagagagagagagagagagagagagatatatatatagagagagagagagagagagagatagagagagagagagagaccctggcatgagggtctgctatacaaactgatggaaagtggtgttgggtggtgttgggggtaaaacatacgacattataaaatccatgtacacaaacaacaagtgtgcggttaaaattggcaaaaaacacacacatttcttcacacagggtcgtggggttagacagggatgcagtttaagccccaccctcttcaacatatatatcaacgaattggcgcgggcactagaaaagtctgcagcacccggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1802891 False 3603 lncRNA 0.44 2 66685211 66688975
TU1802892 False 3549 lncRNA 0.44 2 66685211 66688975
TU1802893 True 3711 lncRNA 0.44 2 66685211 66688975

Neighbor

gene id symbol gene type direction distance location
ddx39b uap56 coding downstream 371312 66294113 ~ 66313899 (-)
ppp1r11 ppp1r11 coding downstream 442486 66238098 ~ 66242725 (-)
LOC110496716 LOC106589044 coding downstream 470004 66180396 ~ 66215207 (-)
LOC110496892 LOC106589045 coding downstream 505620 66170696 ~ 66179591 (-)
LOC110496715 LOC106589043 coding downstream 517540 66136708 ~ 66167671 (-)
LOC110496727 LOC106589058 coding upstream 4363 66693338 ~ 66696327 (-)
LOC110496726 LOC106593810 coding upstream 59207 66748182 ~ 66775081 (-)
LOC110496895 NA coding upstream 98073 66787048 ~ 66788994 (-)
LOC110496725 LOC106589055 coding upstream 113895 66802870 ~ 66810492 (-)
LOC118941007 NA coding upstream 168962 66857937 ~ 66870926 (-)
G1575704 NA non-coding downstream 1516 66682916 ~ 66683695 (-)
G1575664 NA non-coding downstream 82141 66601914 ~ 66603070 (-)
G1575651 NA non-coding downstream 126052 66558557 ~ 66559159 (-)
G1575631 NA non-coding downstream 168629 66516081 ~ 66516582 (-)
G1575630 NA non-coding downstream 169917 66514976 ~ 66515294 (-)
G1575706 NA non-coding upstream 2164 66691139 ~ 66691466 (-)
G1575707 NA non-coding upstream 2616 66691591 ~ 66691945 (-)
G1575708 NA non-coding upstream 2977 66691952 ~ 66692361 (-)
G1575711 NA non-coding upstream 9098 66698073 ~ 66698297 (-)
G1575721 NA non-coding upstream 24626 66713601 ~ 66714052 (-)
G1575541 NA other downstream 380035 66301415 ~ 66305176 (-)
G1575475 NA other downstream 628972 66055682 ~ 66056239 (-)
G1575457 NA other downstream 631476 66014469 ~ 66053735 (-)
G1575282 NA other downstream 886536 65797630 ~ 65798675 (-)
G1575774 NA other upstream 137607 66826582 ~ 66826877 (-)
LOC118941008 NA other upstream 369202 67058124 ~ 67058673 (-)
G1575977 NA other upstream 514226 67203201 ~ 67203487 (-)

Expression


Co-expression Network