G1575747


Basic Information

Item Value
gene id G1575747
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 66799157 ~ 66802471 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1802946
ttcacacactgttgctggtattttggcccattcctccatgcagatctcctctagagcagtgatgttttggggctgttgctgggcaacatggactttcaactccctccaaagattttctatggggttgagatctggagactggctaggccactccaggaccctgaaatgcttcttacgaagccactccttcgttgccagggcggtgtgtttgggatcattgtcatgaaagacccagccacatttcatcttcaatgcccttgctgatggaaggaggttttcactcaaaatctcacgatacatggccccattcattctttcctttacacggatcagtcgtcctggtccctttgcagaaaaacagccccaaagcattatctttttaagtgggagaacttgcacaattggtggctgactaaatacttttttgccccactgtatatatatatatatatattactgtattatCACATGATTTACAGTGGGTGTGTTTACTCACATGTGTAAACACTCCGGCCTCATTGAGCATTACACCCATTACCTGTACTCCTGTACTCACGCACCGAACCAACAACCTTCTCTCTAATTGGTCAATTTATTCCAAGCTCTTATTGGCCATCAATGCATGTCCATGTCCATCAATGCACTGACGTGAACGCATGAACAAGTAGAAGCAATGTAGGGGAAAGCGTACTGGGAACTTGCTTACACTTGTCCAATTCTTTATCGatgtagtgtagatgaagggaaggagaggaggaaaggaaacaGCTGAAGACCATTGAGATACAGCCTGTGTGAAGTGTCTTAAGTTCAACTGTCGTGAGGAACCTTATTAACATTTCAAACGATCATGATGTTGAGTGAAGTGAAtaggtgtagtatagtatacCTGTATAGTATAGCTGCATAGTATACATGTATGGTATATACCTGTATAGTATATACCTGCATAGTATCTACCTGTATAGTATAGCTGCATAGTATACATGTATGGTATATACCTGTATAGTATACCTGCATAGTATATACCTGTATAGTATATACATGCATAGTATCTACCTGTATAGTATAGCTGCATAGTATACATGTATGGTATATACCTGTATAGTATACCTGTATGGTACATACCTGTATAGTATATACCTGCATGTTATACCTGCATAGTACATACCTGTATAGTATATACctgtataggatacatgtatggTATATACCTGCATAGTATATACCTGTATTGTATACCTTTATGGTATATACCTGTATAGTTTATACCTGCATTGTATATACCTGTATAGTATAGCTGCATAGTATACATGTATGGTATATACCTGTATAGTATACCTGCATAGTATATACCTGTATAGTATATACATGCATAGTATATACCTGTATGGTATATACCTGCATATGATATACCTGTATGGTATATACCTGTATAGTATACCTGTATAGTATACCTGTATCATATATACCTGCATAGTATATACCTGTATAGTATATACATGCATAGTATATACCTGTATGGTATATACCTGTATAGTATACCTGTATAGTATACCTGTATCATATATACCTGCATAGTATATACCTGTATAGTATACCTGTATGGTATATACCTGTATAGTATACATGTATGGTACATACCTGTATAGTATATACCTGCATATTATACCTGCATAGTACATACCTGTATAGTATATACctgtataggataTGGTATATACCTGCATAGTATATTCCTGTATAGTATACCTGTATAGTATATACcTGTATAGTATATACCTGTGTAGTATATACCTGTATAGTATATACCTGTATGGTATACCTGTATAGTATATACCTGTATGGTATACCTGTATTGTATATACCTGTATAGTATATACCTGTATAGTATACCTGTATAGTATATACCTGTGTGGTATACCTGTATAGTATATACCTGTATAGTATATACCTGTATAGTATATACCTGTATGGTATACCTGTATAGTATACCTGTATAGTATATACCTGTGTGGTGTACCTGTATAGTATATACCTGTATAGTATATACCTGTATAGTATGCCTGTATAGTATATACCTGTATGGTATACCTGTATAGTATATACctgtataggatacatgtatggTATATGTggtatactatagtatataccTGTATAGTATACCTGTATAGTATATACCTGTGTggtatactatagtatataccTGTATGGTATACCTGTATAGTATATACCTGTGTggtatactatagtatataccTGTATGGTATACCTGTATAGTATATACCTGTGTggtatactatagtatataccTGTATGGTATACCTGTATAGTATATACCTGTGTggtatactatagtatataccTGTATGGTATACCTGTATAGTATATACCTGTGTggtatactatagtatataccTGTATGGTATACCTGTATAGTATATACCTGTGTGGTATACCTTTATGTGAGAATTGGAGTGGAGCAAACGGTTGTCTGCTGAATAAACCCCTGATCTGCAAACTCTACCTGGAGTTGAATTACTGATGTTCTACTGACTACTGACTCAGGTCTCGACGTTTAACACTTGTCCGGGACAAGTAAAAAACATTTAGGATAAGACTGCATATCGCAATGTCAAACACTTTCTGAGATCAGAATCGGATCAGAGATGCCAACATTGGAATAATACATAAATAACGCAGCAAGGTGTAGGAAATGTGCAGTTTGGCTACAGCCTTGTGTCCAAACCAATGCTGACATGAGGGAGACGCCAGGAAATGTAGCATAACTTAAATGAATCtttgaattacatacagtaccagtcgaaagtttggacacgctTATTCATTCCATGGTTTATTTTAATTTTCctataatagtggagacatcagaactatgaaataacacatatggaatcatgtagcaaccaaaaaagtgttaaacaaatcaaaatatattcttcaaaagttaaattccacaaatgaaaagttaatttgtgatatttctttccttcttaatgcgtttgagccaatcagttgtgttgtgacaaggtagggatggtatacagaagatagccctatttggtaaaagaccaagtccatattatggcaagaacagctcaaataagcaaagagagacgacagtccatcat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1802946 True 3155 lncRNA 0.36 3 66799157 66802471

Neighbor

gene id symbol gene type direction distance location
LOC110496895 NA coding downstream 10163 66787048 ~ 66788994 (-)
LOC110496726 LOC106593810 coding downstream 24076 66748182 ~ 66775081 (-)
LOC110496727 LOC106589058 coding downstream 102830 66693338 ~ 66696327 (-)
ddx39b uap56 coding downstream 485258 66294113 ~ 66313899 (-)
ppp1r11 ppp1r11 coding downstream 556432 66238098 ~ 66242725 (-)
LOC110496725 LOC106589055 coding upstream 399 66802870 ~ 66810492 (-)
LOC118941007 NA coding upstream 55466 66857937 ~ 66870926 (-)
LOC118941008 NA coding upstream 255653 67058124 ~ 67058673 (-)
sox4a LOC106589061 coding upstream 306107 67105914 ~ 67112583 (-)
LOC110496729 LOC106589066 coding upstream 523399 67325870 ~ 67337196 (-)
G1575765 NA non-coding downstream 974 66797150 ~ 66798183 (-)
G1575762 NA non-coding downstream 8106 66790109 ~ 66791051 (-)
G1575739 NA non-coding downstream 43715 66752695 ~ 66755442 (-)
G1575737 NA non-coding downstream 52495 66746449 ~ 66746662 (-)
G1575736 NA non-coding downstream 55249 66742104 ~ 66743908 (-)
G1575780 NA non-coding upstream 34069 66836540 ~ 66836924 (-)
G1575802 NA non-coding upstream 74439 66876910 ~ 66877138 (-)
G1575804 NA non-coding upstream 78982 66881453 ~ 66891836 (-)
G1575805 NA non-coding upstream 90643 66893114 ~ 66894046 (-)
G1575814 NA non-coding upstream 105859 66908330 ~ 66910169 (-)
G1575541 NA other downstream 493981 66301415 ~ 66305176 (-)
G1575475 NA other downstream 742918 66055682 ~ 66056239 (-)
G1575457 NA other downstream 745422 66014469 ~ 66053735 (-)
G1575282 NA other downstream 1000482 65797630 ~ 65798675 (-)
G1575774 NA other upstream 24111 66826582 ~ 66826877 (-)
G1575977 NA other upstream 400730 67203201 ~ 67203487 (-)

Expression


Co-expression Network