Gene
RNA
| Item | Value |
|---|---|
| gene id | G1575894 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 67072242 ~ 67072653 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: histone-lysine N-methyltransferase SUV39H1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1803119 | True | 412 | lncRNA | 0.42 | 1 | 67072242 | 67072653 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941008 | NA | coding | downstream | 13693 | 67058124 ~ 67058673 (-) |
| LOC118941007 | NA | coding | downstream | 201316 | 66857937 ~ 66870926 (-) |
| LOC110496725 | LOC106589055 | coding | downstream | 261750 | 66802870 ~ 66810492 (-) |
| LOC110496895 | NA | coding | downstream | 283248 | 66787048 ~ 66788994 (-) |
| LOC110496726 | LOC106593810 | coding | downstream | 297161 | 66748182 ~ 66775081 (-) |
| sox4a | LOC106589061 | coding | upstream | 35925 | 67105914 ~ 67112583 (-) |
| LOC110496729 | LOC106589066 | coding | upstream | 253217 | 67325870 ~ 67337196 (-) |
| srfbp1 | LOC106589067 | coding | upstream | 268735 | 67341388 ~ 67348984 (-) |
| fndc5b | LOC106589070 | coding | upstream | 334659 | 67407312 ~ 67441367 (-) |
| LOC118941009 | NA | coding | upstream | 470908 | 67543561 ~ 67558111 (-) |
| G1575886 | NA | non-coding | downstream | 20268 | 67051682 ~ 67051974 (-) |
| G1575885 | NA | non-coding | downstream | 20644 | 67051379 ~ 67051598 (-) |
| G1575867 | NA | non-coding | downstream | 44459 | 67027519 ~ 67027783 (-) |
| G1575854 | NA | non-coding | downstream | 64722 | 67007184 ~ 67007520 (-) |
| G1575820 | NA | non-coding | downstream | 153566 | 66918145 ~ 66918676 (-) |
| G1575905 | NA | non-coding | upstream | 44520 | 67117173 ~ 67117386 (-) |
| G1575907 | NA | non-coding | upstream | 46968 | 67119621 ~ 67119917 (-) |
| G1575910 | NA | non-coding | upstream | 54329 | 67126982 ~ 67127425 (-) |
| G1575920 | NA | non-coding | upstream | 68652 | 67141305 ~ 67141693 (-) |
| G1575774 | NA | other | downstream | 245365 | 66826582 ~ 66826877 (-) |
| G1575541 | NA | other | downstream | 767066 | 66301415 ~ 66305176 (-) |
| G1575977 | NA | other | upstream | 130548 | 67203201 ~ 67203487 (-) |
| G1576222 | NA | other | upstream | 328795 | 67401448 ~ 67441976 (-) |
| G1576491 | NA | other | upstream | 842535 | 67915188 ~ 67955212 (-) |
| LOC118941211 | NA | other | upstream | 1549595 | 68622013 ~ 68626119 (-) |
| G1577745 | NA | other | upstream | 1675959 | 68748612 ~ 68787686 (-) |
