Gene
RNA
| Item | Value |
|---|---|
| gene id | G1575945 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 67170222 ~ 67170436 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1803172 | True | 215 | lncRNA | 0.53 | 1 | 67170222 | 67170436 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sox4a | LOC106589061 | coding | downstream | 57639 | 67105914 ~ 67112583 (-) |
| LOC118941008 | NA | coding | downstream | 111673 | 67058124 ~ 67058673 (-) |
| LOC118941007 | NA | coding | downstream | 299296 | 66857937 ~ 66870926 (-) |
| LOC110496725 | LOC106589055 | coding | downstream | 359730 | 66802870 ~ 66810492 (-) |
| LOC110496895 | NA | coding | downstream | 381228 | 66787048 ~ 66788994 (-) |
| LOC110496729 | LOC106589066 | coding | upstream | 155434 | 67325870 ~ 67337196 (-) |
| srfbp1 | LOC106589067 | coding | upstream | 170952 | 67341388 ~ 67348984 (-) |
| fndc5b | LOC106589070 | coding | upstream | 236876 | 67407312 ~ 67441367 (-) |
| LOC118941009 | NA | coding | upstream | 373125 | 67543561 ~ 67558111 (-) |
| eif3i | eif3i | coding | upstream | 491689 | 67662125 ~ 67668116 (-) |
| G1575920 | NA | non-coding | downstream | 28529 | 67141305 ~ 67141693 (-) |
| G1575910 | NA | non-coding | downstream | 42797 | 67126982 ~ 67127425 (-) |
| G1575907 | NA | non-coding | downstream | 50305 | 67119621 ~ 67119917 (-) |
| G1575905 | NA | non-coding | downstream | 52836 | 67117173 ~ 67117386 (-) |
| G1575948 | NA | non-coding | upstream | 4634 | 67175070 ~ 67175383 (-) |
| G1575955 | NA | non-coding | upstream | 12469 | 67182905 ~ 67183344 (-) |
| G1575972 | NA | non-coding | upstream | 26926 | 67197362 ~ 67197822 (-) |
| G1575990 | NA | non-coding | upstream | 42567 | 67213003 ~ 67213249 (-) |
| G1576226 | NA | non-coding | upstream | 141757 | 67312193 ~ 67313129 (-) |
| G1575774 | NA | other | downstream | 343345 | 66826582 ~ 66826877 (-) |
| G1575541 | NA | other | downstream | 865046 | 66301415 ~ 66305176 (-) |
| G1575977 | NA | other | upstream | 32765 | 67203201 ~ 67203487 (-) |
| G1576222 | NA | other | upstream | 231012 | 67401448 ~ 67441976 (-) |
| G1576491 | NA | other | upstream | 744752 | 67915188 ~ 67955212 (-) |
| LOC118941211 | NA | other | upstream | 1451812 | 68622013 ~ 68626119 (-) |
| G1577745 | NA | other | upstream | 1578176 | 68748612 ~ 68787686 (-) |
