G1576234



Basic Information


Item Value
gene id G1576234
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 67321788 ~ 67322193 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1803537
ccagagttgcctctgctgcagaggataagttcattaagagttaccagcctcagaaattgcagcccaaataaatgcttcagagttcaagtaagacacatctcaacatcaactgtttagaggagactgtgtgaatcaggccttcatgttttgatttgcagcaaagaaaccactactaaaggacaccaataagaagagacttgcttggaatCAAGaagcatgagcaatggacatgagaCTGGAGGAAATGTGTCCTTTTGGTGTGATgaatccaaatgtgagatttttggttccaacggcCGTGTCTGAactgcagagtaggtgaacggatgatctccgcgtgtggttcccaccgtgaggcatggaggaggaggtgtgatgctgtgggggtgctttgctggtgaccctg

Function


NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU1803537 True 406 lncRNA 0.47 1 67321788 67322193

Neighbor


gene id symbol gene type direction distance location
sox4a LOC106589061 coding downstream 209205 67105914 ~ 67112583 (-)
LOC118941008 NA coding downstream 263239 67058124 ~ 67058673 (-)
LOC118941007 NA coding downstream 450862 66857937 ~ 66870926 (-)
LOC110496725 LOC106589055 coding downstream 511296 66802870 ~ 66810492 (-)
LOC110496895 NA coding downstream 532794 66787048 ~ 66788994 (-)
LOC110496729 LOC106589066 coding upstream 3677 67325870 ~ 67337196 (-)
srfbp1 LOC106589067 coding upstream 19195 67341388 ~ 67348984 (-)
fndc5b LOC106589070 coding upstream 85119 67407312 ~ 67441367 (-)
LOC118941009 NA coding upstream 221368 67543561 ~ 67558111 (-)
eif3i eif3i coding upstream 339932 67662125 ~ 67668116 (-)
G1576226 NA non-coding downstream 8659 67312193 ~ 67313129 (-)
G1575990 NA non-coding downstream 108539 67213003 ~ 67213249 (-)
G1575972 NA non-coding downstream 123966 67197362 ~ 67197822 (-)
G1575955 NA non-coding downstream 138444 67182905 ~ 67183344 (-)
G1575948 NA non-coding downstream 146405 67175070 ~ 67175383 (-)
G1576247 NA non-coding upstream 28954 67351147 ~ 67351778 (-)
G1576260 NA non-coding upstream 61950 67384143 ~ 67386610 (-)
G1576222 NA non-coding upstream 79255 67401448 ~ 67441976 (-)
G1576266 NA non-coding upstream 89256 67411449 ~ 67412631 (-)
G1576288 NA non-coding upstream 153266 67475459 ~ 67476466 (-)
G1575977 NA other downstream 118301 67203201 ~ 67203487 (-)
G1575774 NA other downstream 494911 66826582 ~ 66826877 (-)
G1576491 NA other upstream 592995 67915188 ~ 67955212 (-)
LOC118941211 NA other upstream 1300055 68622013 ~ 68626119 (-)
G1577745 NA other upstream 1426419 68748612 ~ 68787686 (-)
G1577996 LOC106589133 other upstream 1990693 69312886 ~ 69315998 (-)

Expression



Co-expression Network