Gene
RNA
| Item | Value |
|---|---|
| gene id | G1576247 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 67351147 ~ 67351778 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: macoilin-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1803551 | False | 214 | lncRNA | 0.53 | 2 | 67351147 | 67351584 |
| TU1803552 | True | 351 | lncRNA | 0.52 | 3 | 67351147 | 67351778 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| srfbp1 | LOC106589067 | coding | downstream | 2163 | 67341388 ~ 67348984 (-) |
| LOC110496729 | LOC106589066 | coding | downstream | 13951 | 67325870 ~ 67337196 (-) |
| sox4a | LOC106589061 | coding | downstream | 238564 | 67105914 ~ 67112583 (-) |
| LOC118941008 | NA | coding | downstream | 292598 | 67058124 ~ 67058673 (-) |
| LOC118941007 | NA | coding | downstream | 480221 | 66857937 ~ 66870926 (-) |
| fndc5b | LOC106589070 | coding | upstream | 55534 | 67407312 ~ 67441367 (-) |
| LOC118941009 | NA | coding | upstream | 191783 | 67543561 ~ 67558111 (-) |
| eif3i | eif3i | coding | upstream | 310347 | 67662125 ~ 67668116 (-) |
| txlna | LOC106589073 | coding | upstream | 318310 | 67670088 ~ 67684423 (-) |
| LOC118941210 | NA | coding | upstream | 347398 | 67699176 ~ 67702000 (-) |
| G1576234 | NA | non-coding | downstream | 28954 | 67321788 ~ 67322193 (-) |
| G1576226 | NA | non-coding | downstream | 38018 | 67312193 ~ 67313129 (-) |
| G1575990 | NA | non-coding | downstream | 137898 | 67213003 ~ 67213249 (-) |
| G1575972 | NA | non-coding | downstream | 153325 | 67197362 ~ 67197822 (-) |
| G1575955 | NA | non-coding | downstream | 167803 | 67182905 ~ 67183344 (-) |
| G1576260 | NA | non-coding | upstream | 32365 | 67384143 ~ 67386610 (-) |
| G1576222 | NA | non-coding | upstream | 49670 | 67401448 ~ 67441976 (-) |
| G1576266 | NA | non-coding | upstream | 59671 | 67411449 ~ 67412631 (-) |
| G1576288 | NA | non-coding | upstream | 123681 | 67475459 ~ 67476466 (-) |
| G1576290 | NA | non-coding | upstream | 128219 | 67479997 ~ 67480440 (-) |
| G1575977 | NA | other | downstream | 147660 | 67203201 ~ 67203487 (-) |
| G1575774 | NA | other | downstream | 524270 | 66826582 ~ 66826877 (-) |
| LOC110496725 | LOC106589055 | other | downstream | 540681 | 66802870 ~ 66810492 (-) |
| G1576491 | NA | other | upstream | 563410 | 67915188 ~ 67955212 (-) |
| LOC118941211 | NA | other | upstream | 1270470 | 68622013 ~ 68626119 (-) |
| G1577745 | NA | other | upstream | 1396834 | 68748612 ~ 68787686 (-) |
| G1577996 | LOC106589133 | other | upstream | 1961108 | 69312886 ~ 69315998 (-) |
