G1576301



Basic Information


Item Value
gene id G1576301
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 67513615 ~ 67513830 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1803612
cacccccttagccagacccagacaacagtccagcacaacaacacccccatagccagacccagacaacagtccagcacaacaacaccccctcaaccagacccagacaacagtccagcacaacaacaccccctcaaccagacccagacaacagtccagcacaacaacacccccttagccagacccagacaacagtccagcacctCAACACCCTCTTag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1803612 True 216 lncRNA 0.56 1 67513615 67513830

Neighbor


gene id symbol gene type direction distance location
fndc5b LOC106589070 coding downstream 72248 67407312 ~ 67441367 (-)
srfbp1 LOC106589067 coding downstream 164631 67341388 ~ 67348984 (-)
LOC110496729 LOC106589066 coding downstream 176419 67325870 ~ 67337196 (-)
sox4a LOC106589061 coding downstream 401032 67105914 ~ 67112583 (-)
LOC118941008 NA coding downstream 455066 67058124 ~ 67058673 (-)
LOC118941009 NA coding upstream 29731 67543561 ~ 67558111 (-)
eif3i eif3i coding upstream 148295 67662125 ~ 67668116 (-)
txlna LOC106589073 coding upstream 156258 67670088 ~ 67684423 (-)
LOC118941210 NA coding upstream 185346 67699176 ~ 67702000 (-)
kpna6 LOC106589075 coding upstream 188711 67702388 ~ 67729353 (-)
G1576300 NA non-coding downstream 2210 67511189 ~ 67511405 (-)
G1576296 NA non-coding downstream 8320 67505078 ~ 67505295 (-)
G1576295 NA non-coding downstream 8589 67504678 ~ 67505026 (-)
G1576294 NA non-coding downstream 17928 67495331 ~ 67495687 (-)
G1576290 NA non-coding downstream 33175 67479997 ~ 67480440 (-)
G1576308 NA non-coding upstream 16702 67530532 ~ 67530921 (-)
G1576309 NA non-coding upstream 17974 67531804 ~ 67627606 (-)
G1576324 NA non-coding upstream 49075 67562905 ~ 67563721 (-)
G1576334 NA non-coding upstream 76361 67590191 ~ 67682321 (-)
G1576359 NA non-coding upstream 176209 67690039 ~ 67699105 (-)
G1576222 NA other downstream 71639 67401448 ~ 67441976 (-)
G1575977 NA other downstream 310128 67203201 ~ 67203487 (-)
LOC118941007 NA other downstream 643416 66857937 ~ 66870926 (-)
G1575774 NA other downstream 686738 66826582 ~ 66826877 (-)
G1576491 NA other upstream 401358 67915188 ~ 67955212 (-)
LOC118941211 NA other upstream 1108418 68622013 ~ 68626119 (-)
G1577745 NA other upstream 1234782 68748612 ~ 68787686 (-)
G1577996 LOC106589133 other upstream 1799056 69312886 ~ 69315998 (-)
G1578111 NA other upstream 2053354 69567184 ~ 69568164 (-)

Expression



Co-expression Network