Gene
RNA
| Item | Value |
|---|---|
| gene id | G1577228 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 68571164 ~ 68573135 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hypothetical protein cypCar_00042753 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1804713 | False | 364 | lncRNA | 0.51 | 3 | 68571164 | 68573135 |
| TU1804714 | True | 200 | lncRNA | 0.52 | 3 | 68572338 | 68572867 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496749 | hpca | coding | downstream | 101837 | 68399984 ~ 68469327 (-) |
| LOC110496744 | LOC106589083 | coding | downstream | 216024 | 68332248 ~ 68355140 (-) |
| khdrbs1b | LOC106589082 | coding | downstream | 275278 | 68275439 ~ 68295886 (-) |
| trnay-gua-61 | NA | coding | downstream | 677017 | 67894060 ~ 67894147 (-) |
| trnay-gua-60 | NA | coding | downstream | 678488 | 67892589 ~ 67892676 (-) |
| LOC118941211 | NA | coding | upstream | 48878 | 68622013 ~ 68626119 (-) |
| hpcal4 | LOC106570705 | coding | upstream | 53741 | 68626876 ~ 68699108 (-) |
| trit1 | LOC106594867 | coding | upstream | 365470 | 68938605 ~ 68996503 (-) |
| myclb | LOC106593562 | coding | upstream | 424134 | 68997269 ~ 69010704 (-) |
| spag1a | LOC106589120 | coding | upstream | 664908 | 69238043 ~ 69262807 (-) |
| G1577216 | NA | non-coding | downstream | 29780 | 68541083 ~ 68541384 (-) |
| G1577128 | NA | non-coding | downstream | 33327 | 68537502 ~ 68537837 (-) |
| G1577123 | NA | non-coding | downstream | 34959 | 68535998 ~ 68536205 (-) |
| G1577104 | NA | non-coding | downstream | 61594 | 68509359 ~ 68509570 (-) |
| G1577101 | NA | non-coding | downstream | 65390 | 68505560 ~ 68505774 (-) |
| G1577234 | NA | non-coding | upstream | 13922 | 68587057 ~ 68589161 (-) |
| G1577241 | NA | non-coding | upstream | 31255 | 68604390 ~ 68604639 (-) |
| G1577242 | NA | non-coding | upstream | 35178 | 68608313 ~ 68608569 (-) |
| G1577243 | NA | non-coding | upstream | 35792 | 68608927 ~ 68609266 (-) |
| G1577245 | NA | non-coding | upstream | 39734 | 68612869 ~ 68613180 (-) |
| G1576491 | NA | other | downstream | 615952 | 67915188 ~ 67955212 (-) |
| G1576222 | NA | other | downstream | 1129188 | 67401448 ~ 67441976 (-) |
| G1575977 | NA | other | downstream | 1367677 | 67203201 ~ 67203487 (-) |
| LOC118941008 | NA | other | downstream | 1512491 | 67058124 ~ 67058673 (-) |
| LOC118941007 | NA | other | downstream | 1700965 | 66857937 ~ 66870926 (-) |
| G1577745 | NA | other | upstream | 175477 | 68748612 ~ 68787686 (-) |
| G1577996 | LOC106589133 | other | upstream | 739751 | 69312886 ~ 69315998 (-) |
| G1578111 | NA | other | upstream | 994049 | 69567184 ~ 69568164 (-) |
| G1578132 | NA | other | upstream | 1031125 | 69604260 ~ 69606902 (-) |
