Gene
RNA
| Item | Value |
|---|---|
| gene id | G1577265 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 68663432 ~ 68666147 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: myc box-dependent-interacting protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1804765 | False | 556 | lncRNA | 0.36 | 3 | 68663432 | 68666147 |
| TU1804764 | True | 431 | lncRNA | 0.36 | 3 | 68663789 | 68665419 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941211 | NA | coding | downstream | 38805 | 68622013 ~ 68626119 (-) |
| nt5c1aa | LOC106589086 | coding | downstream | 61158 | 68542299 ~ 68602274 (-) |
| LOC110496749 | hpca | coding | downstream | 194105 | 68399984 ~ 68469327 (-) |
| LOC110496744 | LOC106589083 | coding | downstream | 308292 | 68332248 ~ 68355140 (-) |
| khdrbs1b | LOC106589082 | coding | downstream | 367546 | 68275439 ~ 68295886 (-) |
| trit1 | LOC106594867 | coding | upstream | 272458 | 68938605 ~ 68996503 (-) |
| myclb | LOC106593562 | coding | upstream | 331122 | 68997269 ~ 69010704 (-) |
| spag1a | LOC106589120 | coding | upstream | 571896 | 69238043 ~ 69262807 (-) |
| LOC110496771 | NA | coding | upstream | 601763 | 69267835 ~ 69269425 (-) |
| LOC110496775 | LOC106589130 | coding | upstream | 667467 | 69333614 ~ 69377896 (-) |
| G1577245 | NA | non-coding | downstream | 50252 | 68612869 ~ 68613180 (-) |
| G1577243 | NA | non-coding | downstream | 54166 | 68608927 ~ 68609266 (-) |
| G1577242 | NA | non-coding | downstream | 54863 | 68608313 ~ 68608569 (-) |
| G1577241 | NA | non-coding | downstream | 58793 | 68604390 ~ 68604639 (-) |
| G1577234 | NA | non-coding | downstream | 74271 | 68587057 ~ 68589161 (-) |
| G1577279 | NA | non-coding | upstream | 34838 | 68700985 ~ 68701309 (-) |
| G1577293 | NA | non-coding | upstream | 51220 | 68717367 ~ 68717647 (-) |
| G1577735 | NA | non-coding | upstream | 66339 | 68732486 ~ 68732724 (-) |
| G1577751 | NA | non-coding | upstream | 92382 | 68758529 ~ 68759063 (-) |
| G1577776 | NA | non-coding | upstream | 177926 | 68844073 ~ 68847564 (-) |
| G1576491 | NA | other | downstream | 708220 | 67915188 ~ 67955212 (-) |
| G1576222 | NA | other | downstream | 1221456 | 67401448 ~ 67441976 (-) |
| G1575977 | NA | other | downstream | 1459945 | 67203201 ~ 67203487 (-) |
| LOC118941008 | NA | other | downstream | 1604759 | 67058124 ~ 67058673 (-) |
| G1577745 | NA | other | upstream | 82465 | 68748612 ~ 68787686 (-) |
| G1577996 | LOC106589133 | other | upstream | 646739 | 69312886 ~ 69315998 (-) |
| G1578111 | NA | other | upstream | 901037 | 69567184 ~ 69568164 (-) |
| G1578132 | NA | other | upstream | 938113 | 69604260 ~ 69606902 (-) |
| G1578107 | NA | other | upstream | 945356 | 69611503 ~ 69615183 (-) |
