Gene
RNA
| Item | Value |
|---|---|
| gene id | G1577279 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 68700985 ~ 68701309 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1804785 | True | 325 | lncRNA | 0.43 | 1 | 68700985 | 68701309 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| hpcal4 | LOC106570705 | coding | downstream | 1877 | 68626876 ~ 68699108 (-) |
| LOC118941211 | NA | coding | downstream | 76358 | 68622013 ~ 68626119 (-) |
| nt5c1aa | LOC106589086 | coding | downstream | 98711 | 68542299 ~ 68602274 (-) |
| LOC110496749 | hpca | coding | downstream | 231658 | 68399984 ~ 68469327 (-) |
| LOC110496744 | LOC106589083 | coding | downstream | 345845 | 68332248 ~ 68355140 (-) |
| trit1 | LOC106594867 | coding | upstream | 237296 | 68938605 ~ 68996503 (-) |
| myclb | LOC106593562 | coding | upstream | 295960 | 68997269 ~ 69010704 (-) |
| spag1a | LOC106589120 | coding | upstream | 536734 | 69238043 ~ 69262807 (-) |
| LOC110496771 | NA | coding | upstream | 566601 | 69267835 ~ 69269425 (-) |
| LOC110496775 | LOC106589130 | coding | upstream | 632305 | 69333614 ~ 69377896 (-) |
| G1577265 | NA | non-coding | downstream | 34838 | 68663432 ~ 68666147 (-) |
| G1577245 | NA | non-coding | downstream | 87805 | 68612869 ~ 68613180 (-) |
| G1577243 | NA | non-coding | downstream | 91719 | 68608927 ~ 68609266 (-) |
| G1577242 | NA | non-coding | downstream | 92416 | 68608313 ~ 68608569 (-) |
| G1577241 | NA | non-coding | downstream | 96346 | 68604390 ~ 68604639 (-) |
| G1577293 | NA | non-coding | upstream | 16058 | 68717367 ~ 68717647 (-) |
| G1577735 | NA | non-coding | upstream | 31177 | 68732486 ~ 68732724 (-) |
| G1577751 | NA | non-coding | upstream | 57220 | 68758529 ~ 68759063 (-) |
| G1577776 | NA | non-coding | upstream | 142764 | 68844073 ~ 68847564 (-) |
| G1577781 | NA | non-coding | upstream | 159083 | 68860392 ~ 68861497 (-) |
| G1576491 | NA | other | downstream | 745773 | 67915188 ~ 67955212 (-) |
| G1576222 | NA | other | downstream | 1259009 | 67401448 ~ 67441976 (-) |
| G1575977 | NA | other | downstream | 1497498 | 67203201 ~ 67203487 (-) |
| LOC118941008 | NA | other | downstream | 1642312 | 67058124 ~ 67058673 (-) |
| G1577745 | NA | other | upstream | 47303 | 68748612 ~ 68787686 (-) |
| G1577996 | LOC106589133 | other | upstream | 611577 | 69312886 ~ 69315998 (-) |
| G1578111 | NA | other | upstream | 865875 | 69567184 ~ 69568164 (-) |
| G1578132 | NA | other | upstream | 902951 | 69604260 ~ 69606902 (-) |
| G1578107 | NA | other | upstream | 910194 | 69611503 ~ 69615183 (-) |
