Gene
RNA
| Item | Value |
|---|---|
| gene id | G1577787 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 68870179 ~ 68871880 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: protein FAM49A-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1805447 | True | 222 | lncRNA | 0.59 | 2 | 68870179 | 68871880 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| hpcal4 | LOC106570705 | coding | downstream | 171071 | 68626876 ~ 68699108 (-) |
| LOC118941211 | NA | coding | downstream | 245552 | 68622013 ~ 68626119 (-) |
| nt5c1aa | LOC106589086 | coding | downstream | 267905 | 68542299 ~ 68602274 (-) |
| LOC110496749 | hpca | coding | downstream | 400852 | 68399984 ~ 68469327 (-) |
| LOC110496744 | LOC106589083 | coding | downstream | 515039 | 68332248 ~ 68355140 (-) |
| trit1 | LOC106594867 | coding | upstream | 66725 | 68938605 ~ 68996503 (-) |
| myclb | LOC106593562 | coding | upstream | 125389 | 68997269 ~ 69010704 (-) |
| spag1a | LOC106589120 | coding | upstream | 366163 | 69238043 ~ 69262807 (-) |
| LOC110496771 | NA | coding | upstream | 396030 | 69267835 ~ 69269425 (-) |
| LOC110496775 | LOC106589130 | coding | upstream | 461734 | 69333614 ~ 69377896 (-) |
| G1577782 | NA | non-coding | downstream | 7920 | 68861669 ~ 68862259 (-) |
| G1577781 | NA | non-coding | downstream | 8682 | 68860392 ~ 68861497 (-) |
| G1577776 | NA | non-coding | downstream | 22615 | 68844073 ~ 68847564 (-) |
| G1577751 | NA | non-coding | downstream | 111116 | 68758529 ~ 68759063 (-) |
| G1577735 | NA | non-coding | downstream | 137455 | 68732486 ~ 68732724 (-) |
| G1577793 | NA | non-coding | upstream | 14557 | 68886437 ~ 68890100 (-) |
| G1577811 | NA | non-coding | upstream | 41757 | 68913637 ~ 68914795 (-) |
| G1577835 | NA | non-coding | upstream | 88555 | 68960435 ~ 68960970 (-) |
| G1577842 | NA | non-coding | upstream | 103351 | 68975231 ~ 68978256 (-) |
| G1577745 | NA | other | downstream | 82493 | 68748612 ~ 68787686 (-) |
| G1576491 | NA | other | downstream | 914967 | 67915188 ~ 67955212 (-) |
| G1576222 | NA | other | downstream | 1428203 | 67401448 ~ 67441976 (-) |
| G1575977 | NA | other | downstream | 1666692 | 67203201 ~ 67203487 (-) |
| G1577996 | LOC106589133 | other | upstream | 441006 | 69312886 ~ 69315998 (-) |
| G1578111 | NA | other | upstream | 695304 | 69567184 ~ 69568164 (-) |
| G1578132 | NA | other | upstream | 732380 | 69604260 ~ 69606902 (-) |
| G1578107 | NA | other | upstream | 739623 | 69611503 ~ 69615183 (-) |
| cibar1 | fam92a1 | other | upstream | 950862 | 69784536 ~ 69826841 (-) |
