Gene
RNA
| Item | Value |
|---|---|
| gene id | G1577854 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 69010775 ~ 69011122 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1805551 | True | 348 | lncRNA | 0.46 | 1 | 69010775 | 69011122 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| myclb | LOC106593562 | coding | downstream | 71 | 68997269 ~ 69010704 (-) |
| trit1 | LOC106594867 | coding | downstream | 14272 | 68938605 ~ 68996503 (-) |
| hpcal4 | LOC106570705 | coding | downstream | 311667 | 68626876 ~ 68699108 (-) |
| LOC118941211 | NA | coding | downstream | 386148 | 68622013 ~ 68626119 (-) |
| nt5c1aa | LOC106589086 | coding | downstream | 408501 | 68542299 ~ 68602274 (-) |
| spag1a | LOC106589120 | coding | upstream | 226921 | 69238043 ~ 69262807 (-) |
| LOC110496771 | NA | coding | upstream | 256788 | 69267835 ~ 69269425 (-) |
| LOC110496775 | LOC106589130 | coding | upstream | 322492 | 69333614 ~ 69377896 (-) |
| LOC110496768 | LOC106589124 | coding | upstream | 701925 | 69713047 ~ 69726728 (-) |
| cibar1 | fam92a1 | coding | upstream | 773414 | 69784536 ~ 69826841 (-) |
| G1577842 | NA | non-coding | downstream | 32519 | 68975231 ~ 68978256 (-) |
| G1577835 | NA | non-coding | downstream | 49805 | 68960435 ~ 68960970 (-) |
| G1577811 | NA | non-coding | downstream | 95980 | 68913637 ~ 68914795 (-) |
| G1577793 | NA | non-coding | downstream | 120675 | 68886437 ~ 68890100 (-) |
| G1577859 | NA | non-coding | upstream | 13370 | 69024492 ~ 69024772 (-) |
| G1577860 | NA | non-coding | upstream | 13884 | 69025006 ~ 69025312 (-) |
| G1577862 | NA | non-coding | upstream | 19449 | 69030571 ~ 69030896 (-) |
| G1577864 | NA | non-coding | upstream | 29236 | 69040358 ~ 69040561 (-) |
| G1577871 | NA | non-coding | upstream | 38707 | 69049829 ~ 69050031 (-) |
| G1577745 | NA | other | downstream | 223089 | 68748612 ~ 68787686 (-) |
| G1576491 | NA | other | downstream | 1055563 | 67915188 ~ 67955212 (-) |
| G1576222 | NA | other | downstream | 1568799 | 67401448 ~ 67441976 (-) |
| G1575977 | NA | other | downstream | 1807288 | 67203201 ~ 67203487 (-) |
| G1577996 | LOC106589133 | other | upstream | 301764 | 69312886 ~ 69315998 (-) |
| G1578111 | NA | other | upstream | 556062 | 69567184 ~ 69568164 (-) |
| G1578132 | NA | other | upstream | 593138 | 69604260 ~ 69606902 (-) |
| G1578107 | NA | other | upstream | 600381 | 69611503 ~ 69615183 (-) |
