G1577873


Basic Information

Item Value
gene id G1577873
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 69057091 ~ 69057580 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1805570
GTGGACTAtatccatggatagagaacagaagattatAGGTCTGAATCTCACTGATGTGTTTGTTTGATTAATGTCTAAGGAAAttcatttccatgtgtcctatctgtgcttgcaGTTCAACAAATTTAACCCAAAATAGtcagcagtgttattaaaagtctcaCTGAAACATTCGGTGAACGTTTTAAGGAAGTTATTACAAAACTCAAAATAACCTGGAACGTCTGTTCTCAgagcgttaataaaacctccctggaaccatattaaaacgttctcagaacctccctggaaccagagtaaaacgttctcagaacctccctggaaccagagtaaaacattctcagaacctccctggaaccagagtaaaacattctcagaacctccctggaaccagagtaaaacattctcagaacctccctggaaccagagtaaaacattctcagaacctccctggaaccatattaaaacgttctcagaacctccctggaac

Function

NR:

description
PREDICTED: coagulation factor VII-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1805570 True 490 lncRNA 0.40 1 69057091 69057580

Neighbor

gene id symbol gene type direction distance location
myclb LOC106593562 coding downstream 46387 68997269 ~ 69010704 (-)
trit1 LOC106594867 coding downstream 60588 68938605 ~ 68996503 (-)
hpcal4 LOC106570705 coding downstream 357983 68626876 ~ 68699108 (-)
LOC118941211 NA coding downstream 432464 68622013 ~ 68626119 (-)
nt5c1aa LOC106589086 coding downstream 454817 68542299 ~ 68602274 (-)
spag1a LOC106589120 coding upstream 180463 69238043 ~ 69262807 (-)
LOC110496771 NA coding upstream 210330 69267835 ~ 69269425 (-)
LOC110496775 LOC106589130 coding upstream 276034 69333614 ~ 69377896 (-)
LOC110496768 LOC106589124 coding upstream 655467 69713047 ~ 69726728 (-)
cibar1 fam92a1 coding upstream 726956 69784536 ~ 69826841 (-)
G1577872 NA non-coding downstream 225 69056625 ~ 69056866 (-)
G1577871 NA non-coding downstream 7060 69049829 ~ 69050031 (-)
G1577864 NA non-coding downstream 16530 69040358 ~ 69040561 (-)
G1577862 NA non-coding downstream 26195 69030571 ~ 69030896 (-)
G1577860 NA non-coding downstream 31779 69025006 ~ 69025312 (-)
G1577875 NA non-coding upstream 906 69058486 ~ 69058725 (-)
G1577876 NA non-coding upstream 1861 69059441 ~ 69059667 (-)
G1577899 NA non-coding upstream 7768 69065348 ~ 69065584 (-)
G1577901 NA non-coding upstream 15505 69073085 ~ 69073760 (-)
G1577905 NA non-coding upstream 24005 69081585 ~ 69081995 (-)
G1577745 NA other downstream 269405 68748612 ~ 68787686 (-)
G1576491 NA other downstream 1101879 67915188 ~ 67955212 (-)
G1576222 NA other downstream 1615115 67401448 ~ 67441976 (-)
G1575977 NA other downstream 1853604 67203201 ~ 67203487 (-)
G1577996 LOC106589133 other upstream 255306 69312886 ~ 69315998 (-)
G1578111 NA other upstream 509604 69567184 ~ 69568164 (-)
G1578132 NA other upstream 546680 69604260 ~ 69606902 (-)
G1578107 NA other upstream 553923 69611503 ~ 69615183 (-)

Expression


Co-expression Network