Gene
RNA
| Item | Value |
|---|---|
| gene id | G1577922 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 69104434 ~ 69107230 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1805630 | False | 410 | lncRNA | 0.47 | 2 | 69104434 | 69105081 |
| TU1805631 | True | 251 | lncRNA | 0.47 | 3 | 69104434 | 69107230 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| myclb | LOC106593562 | coding | downstream | 93730 | 68997269 ~ 69010704 (-) |
| trit1 | LOC106594867 | coding | downstream | 107931 | 68938605 ~ 68996503 (-) |
| hpcal4 | LOC106570705 | coding | downstream | 405326 | 68626876 ~ 68699108 (-) |
| LOC118941211 | NA | coding | downstream | 479807 | 68622013 ~ 68626119 (-) |
| nt5c1aa | LOC106589086 | coding | downstream | 502160 | 68542299 ~ 68602274 (-) |
| spag1a | LOC106589120 | coding | upstream | 130813 | 69238043 ~ 69262807 (-) |
| LOC110496771 | NA | coding | upstream | 160680 | 69267835 ~ 69269425 (-) |
| LOC110496775 | LOC106589130 | coding | upstream | 226384 | 69333614 ~ 69377896 (-) |
| LOC110496768 | LOC106589124 | coding | upstream | 605817 | 69713047 ~ 69726728 (-) |
| cibar1 | fam92a1 | coding | upstream | 677306 | 69784536 ~ 69826841 (-) |
| G1577905 | NA | non-coding | downstream | 22439 | 69081585 ~ 69081995 (-) |
| G1577901 | NA | non-coding | downstream | 30674 | 69073085 ~ 69073760 (-) |
| G1577899 | NA | non-coding | downstream | 38850 | 69065348 ~ 69065584 (-) |
| G1577876 | NA | non-coding | downstream | 44767 | 69059441 ~ 69059667 (-) |
| G1577875 | NA | non-coding | downstream | 45709 | 69058486 ~ 69058725 (-) |
| G1577924 | NA | non-coding | upstream | 10002 | 69117232 ~ 69123920 (-) |
| G1577930 | NA | non-coding | upstream | 16775 | 69124005 ~ 69130025 (-) |
| G1577882 | NA | non-coding | upstream | 26919 | 69134149 ~ 69142759 (-) |
| G1577883 | NA | non-coding | upstream | 29390 | 69136620 ~ 69148812 (-) |
| G1577884 | NA | non-coding | upstream | 29951 | 69137181 ~ 69174656 (-) |
| G1577745 | NA | other | downstream | 316748 | 68748612 ~ 68787686 (-) |
| G1576491 | NA | other | downstream | 1149222 | 67915188 ~ 67955212 (-) |
| G1576222 | NA | other | downstream | 1662458 | 67401448 ~ 67441976 (-) |
| G1575977 | NA | other | downstream | 1900947 | 67203201 ~ 67203487 (-) |
| G1577996 | LOC106589133 | other | upstream | 205656 | 69312886 ~ 69315998 (-) |
| G1578111 | NA | other | upstream | 459954 | 69567184 ~ 69568164 (-) |
| G1578132 | NA | other | upstream | 497030 | 69604260 ~ 69606902 (-) |
| G1578107 | NA | other | upstream | 504273 | 69611503 ~ 69615183 (-) |
