G1578032


Basic Information

Item Value
gene id G1578032
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 69389152 ~ 69389843 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1805856
tacatccacttaggttggagtcattaaaactagtttacatacacttaggttggagtcattaaaactagtttacatccacttaggttggagtcattaaaactagtttacatacacttaggttggagtcattaaaactagtttacatccacttaggttggagtcattaaaactagtttacatccacttaggttggagtcattaaaactagtttacatacacttaggttggagtcattaaaactagtttacatacacttaggttggagtcattaactagtttacatacacttaggttggagtcattaaaactagtttacatacacttaggttggagtctttaaaactagtttacatacacttaggttgaagtcattaactagtttacatacacttaggttggagtctttaaaactcgtttacatccacttaggttggagtctttaaaactcgtttttcaaccactgcacaaatttcttgttaacaaactatagttttggcaagtcggttaggacatctac
>TU1805857
tacatccacttaggttggagtcattaaaactagtttacatacacttaggttggagtcattaaaactagtttacatccacttaggttggagtcattaaaactagtttacatacacttaggttggagtcattaaaactagtttacatccacttaggttggagtcattaaaactagtttacatccacttaggttggagtcattaaaactagtttacatacacttaggttggagtcattaaaactagtttacatacacttaggttggagtcattaactagtttacatacacttaggttggagtcattaaaactagtttacatacacttaggttggagtctttaaaactagtttacatacacttaggttggagtctttaaaactagtttacatacacttaggttggagtcattaaaactagtttacatacacttagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1805856 False 517 lncRNA 0.33 3 69389152 69389843
TU1805857 True 432 lncRNA 0.33 2 69389342 69389843

Neighbor

gene id symbol gene type direction distance location
LOC110496775 LOC106589130 coding downstream 36802 69333614 ~ 69377896 (-)
LOC110496771 NA coding downstream 119727 69267835 ~ 69269425 (-)
spag1a LOC106589120 coding downstream 126345 69238043 ~ 69262807 (-)
myclb LOC106593562 coding downstream 378448 68997269 ~ 69010704 (-)
trit1 LOC106594867 coding downstream 392649 68938605 ~ 68996503 (-)
LOC110496768 LOC106589124 coding upstream 323204 69713047 ~ 69726728 (-)
cibar1 fam92a1 coding upstream 394693 69784536 ~ 69826841 (-)
lrrc69 lrrc69 coding upstream 1069132 70458965 ~ 70490901 (-)
LOC118941214 necab1 coding upstream 1180786 70568365 ~ 70627332 (-)
LOC118941013 necab1 coding upstream 1256100 70645943 ~ 70718404 (-)
G1577996 LOC106589133 non-coding downstream 73154 69312886 ~ 69315998 (-)
G1577988 NA non-coding downstream 83731 69303792 ~ 69305421 (-)
G1577972 NA non-coding downstream 116383 69272246 ~ 69272769 (-)
G1578038 NA non-coding upstream 11021 69400864 ~ 69401536 (-)
G1578045 NA non-coding upstream 28947 69418790 ~ 69419158 (-)
G1578061 NA non-coding upstream 49223 69439066 ~ 69440134 (-)
G1578081 NA non-coding upstream 85786 69475629 ~ 69479524 (-)
G1577878 NA non-coding upstream 97155 69486998 ~ 69507893 (-)
G1577745 NA other downstream 601466 68748612 ~ 68787686 (-)
LOC118941211 NA other downstream 763033 68622013 ~ 68626119 (-)
G1576491 NA other downstream 1433940 67915188 ~ 67955212 (-)
G1576222 NA other downstream 1947176 67401448 ~ 67441976 (-)
G1578111 NA other upstream 177341 69567184 ~ 69568164 (-)
G1578132 NA other upstream 214417 69604260 ~ 69606902 (-)
G1578107 NA other upstream 221660 69611503 ~ 69615183 (-)
G1578414 NA other upstream 695530 70085373 ~ 70085792 (-)

Expression


Co-expression Network