G1578168


Basic Information

Item Value
gene id G1578168
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 69680854 ~ 69682254 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1806033
aaatgcacagtgactttgaaaaagtaaggaaacaaaaaaaaatacatctaaaaaattttgagcatgacaaattcgtgatggtacctgcccattgaaacatattgcaaaagcacagtgactttgaaaaagtaaggaaacataaacaaattcgataaacaaattcgtgatggtacctgcccattaaaacatattgcaaatgcacagtgactttgaaaaagtaaggaaacataaacaaaaaaacatcccaaatttttttttttgggttaccagttgcatattttagatcaccaggtgcacatttcaggtcaccaggtgcacatttcagatcaccaggtgcacggaggaaaatgtttacttttgactttgacttttgacttcctatgacatcatattgcaaatggagaaaacatatgccttatgcacaagtaaaacaaaaagaaatatgtaatacaagttgaccaaggtatagtttgagcaaagtaaagtttgaattttgagcatgacaaattcgtgatggtatctgcccattaaaacatattgcaaatgcacagtgactttgaaaaagtaaggaaacataaacaaaaaaaatcccaaaaattttgttgcacattttagatcatcagttgcacggaggaaaatatttacttttgacttagacttttgacttcctatgacatcatattgcaaatggagaaaacatatgccttatgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1806033 True 712 lncRNA 0.33 2 69680854 69682254

Neighbor

gene id symbol gene type direction distance location
LOC110496775 LOC106589130 coding downstream 328504 69333614 ~ 69377896 (-)
LOC110496771 NA coding downstream 411429 69267835 ~ 69269425 (-)
spag1a LOC106589120 coding downstream 418047 69238043 ~ 69262807 (-)
myclb LOC106593562 coding downstream 670150 68997269 ~ 69010704 (-)
trit1 LOC106594867 coding downstream 684351 68938605 ~ 68996503 (-)
LOC110496768 LOC106589124 coding upstream 30793 69713047 ~ 69726728 (-)
cibar1 fam92a1 coding upstream 102282 69784536 ~ 69826841 (-)
lrrc69 lrrc69 coding upstream 776721 70458965 ~ 70490901 (-)
LOC118941214 necab1 coding upstream 888375 70568365 ~ 70627332 (-)
LOC118941013 necab1 coding upstream 963689 70645943 ~ 70718404 (-)
G1578167 NA non-coding downstream 2861 69677558 ~ 69677993 (-)
G1578164 NA non-coding downstream 7247 69673407 ~ 69673607 (-)
G1578159 NA non-coding downstream 15780 69664470 ~ 69665074 (-)
G1578156 NA non-coding downstream 23859 69656684 ~ 69656995 (-)
G1578144 NA non-coding downstream 48195 69632301 ~ 69632659 (-)
G1578169 NA non-coding upstream 8293 69690547 ~ 69690985 (-)
G1578170 NA non-coding upstream 10706 69692960 ~ 69693238 (-)
G1578171 NA non-coding upstream 14262 69696516 ~ 69696827 (-)
G1578185 NA non-coding upstream 38887 69721141 ~ 69722145 (-)
G1578189 NA non-coding upstream 46338 69728592 ~ 69729024 (-)
G1578107 NA other downstream 65671 69611503 ~ 69615183 (-)
G1578132 NA other downstream 73952 69604260 ~ 69606902 (-)
G1578111 NA other downstream 112690 69567184 ~ 69568164 (-)
G1577996 LOC106589133 other downstream 365847 69312886 ~ 69315998 (-)
G1577745 NA other downstream 893168 68748612 ~ 68787686 (-)
G1578414 NA other upstream 403119 70085373 ~ 70085792 (-)
G1578607 NA other upstream 702581 70384835 ~ 70387475 (-)
G1578765 NA other upstream 743966 70426220 ~ 70426577 (-)

Expression


Co-expression Network