G1578284


Basic Information

Item Value
gene id G1578284
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 69932688 ~ 69933379 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1806167
tccttgcatttattcagaccatattgtcctccttgcctgcccttgcatttattcagaatatattgtgaccttgcctgtccttgcatttattcagaccatattgtcctccttgcctgtccttgcatttattcagaatatattgtgaccttgcctgtccttgcatttattcagaatatattgtgaccttgcctgtccttgcatttattcagaatatattgtgaccttgcctgtccttgcatttattcagaccatattgtcctccttgcctgtccttgcatttattcaaaatatattgtgaccttgcctgtccttgcatttattcagaatatattgtgaccttgcctgtccttgcatgtAGTCAGAATATATTGtcaccttgcctgtccttgcatttattcagaccatattgtcctccttgcctgtccttgcatttattcagaatatattgtgaccttgcctgtccttgcatttattcagaccatattgtcctccttgcctgtccttgcatttattcagaatatattgtgaccttgcctgtccttgcatgtattcagaatatattgtgaccttgcctgtccttgcatgtAGTCAGAATATATTGtcaccttgcctgtccttgcatttattcagaccatattgtcctccttgcctgtccttgcatttattcagaccatattgtcctccttgcctgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1806167 True 692 lncRNA 0.40 1 69932688 69933379

Neighbor

gene id symbol gene type direction distance location
cibar1 fam92a1 coding downstream 105847 69784536 ~ 69826841 (-)
LOC110496768 LOC106589124 coding downstream 205960 69713047 ~ 69726728 (-)
LOC110496775 LOC106589130 coding downstream 580338 69333614 ~ 69377896 (-)
LOC110496771 NA coding downstream 663263 69267835 ~ 69269425 (-)
spag1a LOC106589120 coding downstream 669881 69238043 ~ 69262807 (-)
lrrc69 lrrc69 coding upstream 525596 70458965 ~ 70490901 (-)
LOC118941214 necab1 coding upstream 637250 70568365 ~ 70627332 (-)
LOC118941013 necab1 coding upstream 712564 70645943 ~ 70718404 (-)
LOC118941215 NA coding upstream 801003 70733633 ~ 70735514 (-)
LOC110496779 LOC106589151 coding upstream 843339 70776718 ~ 70789671 (-)
G1578282 NA non-coding downstream 1240 69931126 ~ 69931448 (-)
G1578281 NA non-coding downstream 4670 69927710 ~ 69928018 (-)
G1578264 LOC107756720 non-coding downstream 55379 69877086 ~ 69877309 (-)
G1578263 NA non-coding downstream 57831 69874580 ~ 69874857 (-)
G1578259 NA non-coding downstream 60682 69871793 ~ 69872006 (-)
G1578337 NA non-coding upstream 34555 69967934 ~ 70004971 (-)
G1578352 NA non-coding upstream 69330 70002709 ~ 70025491 (-)
G1578371 NA non-coding upstream 106229 70039608 ~ 70039951 (-)
G1578372 NA non-coding upstream 110116 70043495 ~ 70043733 (-)
G1578378 NA non-coding upstream 122912 70056291 ~ 70056582 (-)
G1578107 NA other downstream 317505 69611503 ~ 69615183 (-)
G1578132 NA other downstream 325786 69604260 ~ 69606902 (-)
G1578111 NA other downstream 364524 69567184 ~ 69568164 (-)
G1577996 LOC106589133 other downstream 617681 69312886 ~ 69315998 (-)
G1578414 NA other upstream 151994 70085373 ~ 70085792 (-)
G1578607 NA other upstream 451456 70384835 ~ 70387475 (-)
G1578765 NA other upstream 492841 70426220 ~ 70426577 (-)
G1578949 NA other upstream 820780 70754159 ~ 70756675 (-)

Expression


Co-expression Network