Gene
RNA
| Item | Value |
|---|---|
| gene id | G1579624 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 71329750 ~ 71331000 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1807839 | True | 315 | lncRNA | 0.46 | 3 | 71329750 | 71331000 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496779 | LOC106589151 | coding | downstream | 540079 | 70776718 ~ 70789671 (-) |
| LOC118941215 | NA | coding | downstream | 594949 | 70733633 ~ 70735514 (-) |
| LOC118941013 | necab1 | coding | downstream | 611346 | 70645943 ~ 70718404 (-) |
| LOC118941214 | necab1 | coding | downstream | 721699 | 70568365 ~ 70627332 (-) |
| lrrc69 | lrrc69 | coding | downstream | 838849 | 70458965 ~ 70490901 (-) |
| LOC118941218 | LOC106589160 | coding | upstream | 473321 | 71804321 ~ 71821112 (-) |
| LOC118941015 | LOC103363662 | coding | upstream | 516433 | 71847433 ~ 71874670 (-) |
| LOC118941016 | NA | coding | upstream | 612228 | 71943228 ~ 71944243 (-) |
| csmd1a | csmd2 | coding | upstream | 684921 | 72015921 ~ 72236753 (-) |
| LOC110496752 | LOC106589094 | coding | upstream | 1687796 | 73006005 ~ 73131439 (-) |
| G1579285 | NA | non-coding | downstream | 10456 | 71318853 ~ 71319294 (-) |
| G1579283 | NA | non-coding | downstream | 13843 | 71315670 ~ 71315907 (-) |
| G1579265 | NA | non-coding | downstream | 33452 | 71296093 ~ 71296298 (-) |
| G1579258 | NA | non-coding | downstream | 38204 | 71291347 ~ 71291546 (-) |
| G1579253 | NA | non-coding | downstream | 42710 | 71286749 ~ 71287040 (-) |
| G1579626 | NA | non-coding | upstream | 14765 | 71345765 ~ 71345997 (-) |
| G1579627 | NA | non-coding | upstream | 22884 | 71353884 ~ 71354099 (-) |
| G1579628 | NA | non-coding | upstream | 23198 | 71354198 ~ 71361210 (-) |
| G1579637 | NA | non-coding | upstream | 32282 | 71363282 ~ 71363628 (-) |
| G1579638 | NA | non-coding | upstream | 49068 | 71380068 ~ 71380294 (-) |
| G1579220 | NA | other | downstream | 86657 | 71242691 ~ 71243093 (-) |
| G1579147 | NA | other | downstream | 175473 | 71153837 ~ 71154277 (-) |
| G1578970 | NA | other | downstream | 517240 | 70811025 ~ 70812510 (-) |
| G1578963 | NA | other | downstream | 531111 | 70797795 ~ 70798639 (-) |
| G1578948 | NA | other | downstream | 568964 | 70759159 ~ 70760786 (-) |
| LOC110518582 | csmd2 | other | upstream | 77973 | 71321529 ~ 71779541 (-) |
| G1579672 | NA | other | upstream | 186869 | 71517869 ~ 71518469 (-) |
| G1579715 | NA | other | upstream | 305487 | 71636487 ~ 71638132 (-) |
| G1579954 | NA | other | upstream | 883174 | 72214174 ~ 72214789 (-) |
