Gene
RNA
| Item | Value |
|---|---|
| gene id | G1579627 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 71353884 ~ 71354099 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1807842 | True | 216 | lncRNA | 0.49 | 1 | 71353884 | 71354099 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496779 | LOC106589151 | coding | downstream | 564213 | 70776718 ~ 70789671 (-) |
| LOC118941215 | NA | coding | downstream | 619083 | 70733633 ~ 70735514 (-) |
| LOC118941013 | necab1 | coding | downstream | 635480 | 70645943 ~ 70718404 (-) |
| LOC118941214 | necab1 | coding | downstream | 745833 | 70568365 ~ 70627332 (-) |
| lrrc69 | lrrc69 | coding | downstream | 862983 | 70458965 ~ 70490901 (-) |
| LOC118941218 | LOC106589160 | coding | upstream | 450222 | 71804321 ~ 71821112 (-) |
| LOC118941015 | LOC103363662 | coding | upstream | 493334 | 71847433 ~ 71874670 (-) |
| LOC118941016 | NA | coding | upstream | 589129 | 71943228 ~ 71944243 (-) |
| csmd1a | csmd2 | coding | upstream | 661822 | 72015921 ~ 72236753 (-) |
| LOC110496752 | LOC106589094 | coding | upstream | 1664697 | 73006005 ~ 73131439 (-) |
| G1579626 | NA | non-coding | downstream | 7887 | 71345765 ~ 71345997 (-) |
| G1579624 | NA | non-coding | downstream | 22884 | 71329750 ~ 71331000 (-) |
| G1579285 | NA | non-coding | downstream | 34590 | 71318853 ~ 71319294 (-) |
| G1579283 | NA | non-coding | downstream | 37977 | 71315670 ~ 71315907 (-) |
| G1579265 | NA | non-coding | downstream | 57586 | 71296093 ~ 71296298 (-) |
| G1579628 | NA | non-coding | upstream | 99 | 71354198 ~ 71361210 (-) |
| G1579637 | NA | non-coding | upstream | 9183 | 71363282 ~ 71363628 (-) |
| G1579638 | NA | non-coding | upstream | 25969 | 71380068 ~ 71380294 (-) |
| G1579639 | NA | non-coding | upstream | 53329 | 71407428 ~ 71408884 (-) |
| G1579644 | NA | non-coding | upstream | 59459 | 71413558 ~ 71414162 (-) |
| G1579220 | NA | other | downstream | 110791 | 71242691 ~ 71243093 (-) |
| G1579147 | NA | other | downstream | 199607 | 71153837 ~ 71154277 (-) |
| G1578970 | NA | other | downstream | 541374 | 70811025 ~ 70812510 (-) |
| G1578963 | NA | other | downstream | 555245 | 70797795 ~ 70798639 (-) |
| G1578948 | NA | other | downstream | 593098 | 70759159 ~ 70760786 (-) |
| LOC110518582 | csmd2 | other | upstream | 54874 | 71321529 ~ 71779541 (-) |
| G1579672 | NA | other | upstream | 163770 | 71517869 ~ 71518469 (-) |
| G1579715 | NA | other | upstream | 282388 | 71636487 ~ 71638132 (-) |
| G1579954 | NA | other | upstream | 860075 | 72214174 ~ 72214789 (-) |
