G1579715



Basic Information


Item Value
gene id G1579715
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 71636487 ~ 71638132 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1807949
actatacagggaatagggctctggtctatagtagtaccactatatagggaatagggctctggtctatagtagtaccactatatagggaatagggctctggtctatattagtaccactatatagggaatagggctctggtctatagtagtaccactagtagtaccactatatagggaatagggctctggtctatagtagtgactatatagggaatagggctctggtctatagtagtaccactataatagggaatagggctctggtctatagtagtgactatatagggaatagggctctggtctatagtagtgactatatagggaatagggctctggtctatagtagtgactatatagggaaaattgctctggtctatagtagtaccactatatagggaacagggctctggtctatagtagtaccactatatagggatttgggctctggtctatagtagtaccactatatagggaatagggccctggtctatagtagtaccactatatagggaacatggtTCATTTAAGATGGTCTCAGTAAGTGCAGACAAACAGACTGCTATTAATTCTCTATCATCACAGAGGGCTCCAACTttgggctgagagagagacaaagagagagagacagagcgagagagatagacaagagagagagagagagagggagagagagaaaggagagagagagagagagagagagaaagagagagagagaaagagagagacagagatagcgacagagagagagagagactactatgtacagactcagtgagcatagccttgctattgagaaaggccgctgtagacagacatggctctcaagagaagacaggctatgtgctcactgcccacaaaatgaggtggaaactgagctgtacttcctaacctcctgcccaatgtatgaccatattagagagacatatttccctcagattacacagatccacaaagaattcgaaaacaaatccaattttgataaactcccatatctactgggtgaaattccacagtgtgacatcacagcagcaagatttgtgacctgttgccacgagaaaagggcaaccagtgaagaacacacaccattgtaaatacaacccatatttatgcttatttattttatcttgtgt

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1807949 True 1129 TUCP 0.43 3 71636487 71638132

Neighbor


gene id symbol gene type direction distance location
LOC110496779 LOC106589151 coding downstream 846816 70776718 ~ 70789671 (-)
LOC118941215 NA coding downstream 901686 70733633 ~ 70735514 (-)
LOC118941013 necab1 coding downstream 918083 70645943 ~ 70718404 (-)
LOC118941214 necab1 coding downstream 1028436 70568365 ~ 70627332 (-)
lrrc69 lrrc69 coding downstream 1145586 70458965 ~ 70490901 (-)
LOC118941218 LOC106589160 coding upstream 166189 71804321 ~ 71821112 (-)
LOC118941015 LOC103363662 coding upstream 209301 71847433 ~ 71874670 (-)
LOC118941016 NA coding upstream 305096 71943228 ~ 71944243 (-)
csmd1a csmd2 coding upstream 377789 72015921 ~ 72236753 (-)
LOC110496752 LOC106589094 coding upstream 1380664 73006005 ~ 73131439 (-)
G1579714 NA non-coding downstream 681 71635584 ~ 71635806 (-)
G1579712 NA non-coding downstream 5060 71631192 ~ 71631427 (-)
G1579673 NA non-coding downstream 117407 71518735 ~ 71519080 (-)
G1579666 NA non-coding downstream 138140 71498120 ~ 71498347 (-)
G1579664 NA non-coding downstream 139157 71492251 ~ 71497330 (-)
G1579720 NA non-coding upstream 15177 71653309 ~ 71654010 (-)
G1579721 NA non-coding upstream 16320 71654452 ~ 71654678 (-)
G1579722 NA non-coding upstream 16996 71655128 ~ 71655739 (-)
G1579733 NA non-coding upstream 52982 71691114 ~ 71694157 (-)
G1579741 NA non-coding upstream 67737 71705869 ~ 71706475 (-)
G1579672 NA other downstream 118018 71517869 ~ 71518469 (-)
LOC110518582 csmd2 other downstream 208703 71321529 ~ 71779541 (-)
G1579220 NA other downstream 393394 71242691 ~ 71243093 (-)
G1579147 NA other downstream 482210 71153837 ~ 71154277 (-)
G1578970 NA other downstream 823977 70811025 ~ 70812510 (-)
G1579954 NA other upstream 576042 72214174 ~ 72214789 (-)
G1580625 NA other upstream 1409701 73047833 ~ 73048686 (-)
G1580844 NA other upstream 1887150 73525282 ~ 73525595 (-)
LOC110496905 LOC106593151 other upstream 2185899 73822008 ~ 74115567 (-)

Expression



Co-expression Network