Gene
RNA
| Item | Value |
|---|---|
| gene id | G1579398 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 71700619 ~ 71701099 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1807552 | True | 241 | lncRNA | 0.41 | 2 | 71700619 | 71701099 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118940973 | NA | coding | upstream | 490976 | 71208388 ~ 71209643 (+) |
| LOC118941014 | NA | coding | upstream | 641464 | 71058367 ~ 71059155 (+) |
| LOC110515436 | LOC106570762 | coding | upstream | 747824 | 70857223 ~ 70952795 (+) |
| acot13 | acot13 | coding | upstream | 923267 | 70774594 ~ 70777352 (+) |
| LOC118941216 | NA | coding | upstream | 936945 | 70760086 ~ 70763674 (+) |
| LOC118941017 | NA | coding | downstream | 243143 | 71944242 ~ 71946176 (+) |
| LOC118941219 | LOC103143335 | coding | downstream | 1191755 | 72892854 ~ 72909233 (+) |
| yars1 | yars | coding | downstream | 1304797 | 73005896 ~ 73016843 (+) |
| sync | sync | coding | downstream | 1429700 | 73130799 ~ 73174920 (+) |
| LOC110496903 | LOC106570720 | coding | downstream | 1500700 | 73201799 ~ 73281251 (+) |
| G1579386 | NA | non-coding | upstream | 41130 | 71659254 ~ 71659489 (+) |
| G1579384 | NA | non-coding | upstream | 45969 | 71654447 ~ 71654650 (+) |
| G1579380 | NA | non-coding | upstream | 58843 | 71641575 ~ 71641776 (+) |
| G1579378 | NA | non-coding | upstream | 64588 | 71635829 ~ 71636031 (+) |
| G1579377 | NA | non-coding | upstream | 66845 | 71633542 ~ 71633774 (+) |
| G1579414 | NA | non-coding | downstream | 30908 | 71732007 ~ 71733128 (+) |
| G1579422 | NA | non-coding | downstream | 50968 | 71752067 ~ 71754997 (+) |
| G1579435 | NA | non-coding | downstream | 91712 | 71792811 ~ 71794904 (+) |
| G1579440 | NA | non-coding | downstream | 99265 | 71800364 ~ 71801566 (+) |
| G1579445 | NA | non-coding | downstream | 120468 | 71821567 ~ 71822020 (+) |
| G1578630 | NA | other | upstream | 1281346 | 70418859 ~ 70419273 (+) |
| LOC110519153 | runx1t1 | other | upstream | 1401494 | 70192261 ~ 70385585 (+) |
| G1577699 | NA | other | upstream | 1936366 | 69762713 ~ 69764253 (+) |
| G1577567 | NA | other | upstream | 2084276 | 69615279 ~ 69616967 (+) |
| si:ch211-215i13.3 | LOC106589127 | other | upstream | 2325702 | 69360411 ~ 69374917 (+) |
| G1579579 | NA | other | downstream | 437058 | 72138157 ~ 72138592 (+) |
| G1579615 | NA | other | downstream | 526232 | 72227331 ~ 72227659 (+) |
| G1579986 | NA | other | downstream | 561317 | 72262416 ~ 72263220 (+) |
| G1580222 | NA | other | downstream | 894965 | 72596064 ~ 72596671 (+) |
