G1579414


Basic Information

Item Value
gene id G1579414
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 71732007 ~ 71733128 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1807569
AGACAGTACTATAATCTGGCATACTGTAATGAATCACTAGTAGTAGACAGTACTGTAATCTGGCATACTGTAATGAATCACTAGTAGTAGATGGTACTATAATCTGGCATACTGTAATGAATCACTAGTAGTAGATGGAACCAAAACAGATGGTACTATAATCTGGCATACTGTAATGAATCACTAGTAGTAGACAGTACTATAATCTAGCATACTGTaatgaatgatggtgttgtagaCAGTACTATAATCTGACATACTCTAATGTGGCACTATAATCTGGCATACTGTAATGAATCACCAGTAGTAGACAGTACTATAATATGGCATACTGTAATGAATCACTATTAGTAGACAGTACTATAATCTGGCATAATGTAATGAATCACTAGTAGTAGACAGTACTATAATCTGGCATACTGTAATGAATCACTAGTAGTAGACAGTACTATAATCTGGCATACTGTAATGAATCACTAGTAGTAGACAGTACTATAATCTGGCATACTGTAATAAATCACTAGTAGTAGACAGTACTATAATCTGGCATACTGTAATGAATCACTAGTAGTAGACAGTACTATAATCTGGCATACTGTAATGAATCACTAGTAGTAGACAGTACTATCATCTGGCATACTGTAATGAATCACTAGTAGTAGACGGTACCAAAACAGATGGTACTGGTTCTAATGTCAACTATTACACAGATTTGACAACATTGGTTTATCCATGTCTGGCTGTAGTGTAATCACAATAGGCCCATCGCATCCTCTGCCTCCTCGAATCTCATGTAGACTCTGATGAACGGCACAAACAATACATGAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1807569 True 830 lncRNA 0.36 2 71732007 71733128
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118940973 NA coding upstream 522364 71208388 ~ 71209643 (+)
LOC118941014 NA coding upstream 672852 71058367 ~ 71059155 (+)
LOC110515436 LOC106570762 coding upstream 779212 70857223 ~ 70952795 (+)
acot13 acot13 coding upstream 954655 70774594 ~ 70777352 (+)
LOC118941216 NA coding upstream 968333 70760086 ~ 70763674 (+)
LOC118941017 NA coding downstream 211114 71944242 ~ 71946176 (+)
LOC118941219 LOC103143335 coding downstream 1159726 72892854 ~ 72909233 (+)
yars1 yars coding downstream 1272768 73005896 ~ 73016843 (+)
sync sync coding downstream 1397671 73130799 ~ 73174920 (+)
LOC110496903 LOC106570720 coding downstream 1468671 73201799 ~ 73281251 (+)
G1579398 NA non-coding upstream 30908 71700619 ~ 71701099 (+)
G1579386 NA non-coding upstream 72518 71659254 ~ 71659489 (+)
G1579384 NA non-coding upstream 77357 71654447 ~ 71654650 (+)
G1579380 NA non-coding upstream 90231 71641575 ~ 71641776 (+)
G1579378 NA non-coding upstream 95976 71635829 ~ 71636031 (+)
G1579422 NA non-coding downstream 18939 71752067 ~ 71754997 (+)
G1579435 NA non-coding downstream 59683 71792811 ~ 71794904 (+)
G1579440 NA non-coding downstream 67236 71800364 ~ 71801566 (+)
G1579445 NA non-coding downstream 88439 71821567 ~ 71822020 (+)
G1579467 NA non-coding downstream 124469 71857597 ~ 71858361 (+)
G1578630 NA other upstream 1312734 70418859 ~ 70419273 (+)
LOC110519153 runx1t1 other upstream 1432882 70192261 ~ 70385585 (+)
G1577699 NA other upstream 1967754 69762713 ~ 69764253 (+)
G1577567 NA other upstream 2115664 69615279 ~ 69616967 (+)
si:ch211-215i13.3 LOC106589127 other upstream 2357090 69360411 ~ 69374917 (+)
G1579579 NA other downstream 405029 72138157 ~ 72138592 (+)
G1579615 NA other downstream 494203 72227331 ~ 72227659 (+)
G1579986 NA other downstream 529288 72262416 ~ 72263220 (+)
G1580222 NA other downstream 862936 72596064 ~ 72596671 (+)

Expression

G1579414 Expression in all Baseline Samples

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G1579414 Expression in each Bioproject

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G1579414 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 20.
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Co-expression Network