Gene
RNA
| Item | Value |
|---|---|
| gene id | G1579435 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 71792811 ~ 71794904 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1807599 | True | 454 | lncRNA | 0.42 | 2 | 71792811 | 71794904 |
71,790,400
71,790,800
71,791,200
71,791,600
71,792,000
71,792,400
71,792,800
71,793,200
71,793,600
71,794,000
71,794,400
71,794,800
71,795,200
71,795,600
71,796,000
71,796,400
71,796,800
71,797,200
71,797,600
71,798,000
71,798,400
NC_048582.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118940973 | NA | coding | upstream | 583168 | 71208388 ~ 71209643 (+) |
| LOC118941014 | NA | coding | upstream | 733656 | 71058367 ~ 71059155 (+) |
| LOC110515436 | LOC106570762 | coding | upstream | 840016 | 70857223 ~ 70952795 (+) |
| acot13 | acot13 | coding | upstream | 1015459 | 70774594 ~ 70777352 (+) |
| LOC118941216 | NA | coding | upstream | 1029137 | 70760086 ~ 70763674 (+) |
| LOC118941017 | NA | coding | downstream | 149338 | 71944242 ~ 71946176 (+) |
| LOC118941219 | LOC103143335 | coding | downstream | 1097950 | 72892854 ~ 72909233 (+) |
| yars1 | yars | coding | downstream | 1210992 | 73005896 ~ 73016843 (+) |
| sync | sync | coding | downstream | 1335895 | 73130799 ~ 73174920 (+) |
| LOC110496903 | LOC106570720 | coding | downstream | 1406895 | 73201799 ~ 73281251 (+) |
| G1579422 | NA | non-coding | upstream | 37814 | 71752067 ~ 71754997 (+) |
| G1579414 | NA | non-coding | upstream | 59683 | 71732007 ~ 71733128 (+) |
| G1579398 | NA | non-coding | upstream | 91712 | 71700619 ~ 71701099 (+) |
| G1579386 | NA | non-coding | upstream | 133322 | 71659254 ~ 71659489 (+) |
| G1579384 | NA | non-coding | upstream | 138161 | 71654447 ~ 71654650 (+) |
| G1579440 | NA | non-coding | downstream | 5460 | 71800364 ~ 71801566 (+) |
| G1579445 | NA | non-coding | downstream | 26663 | 71821567 ~ 71822020 (+) |
| G1579467 | NA | non-coding | downstream | 62693 | 71857597 ~ 71858361 (+) |
| G1579472 | NA | non-coding | downstream | 80578 | 71875482 ~ 71875953 (+) |
| G1579477 | NA | non-coding | downstream | 100834 | 71895738 ~ 71901190 (+) |
| G1578630 | NA | other | upstream | 1373538 | 70418859 ~ 70419273 (+) |
| LOC110519153 | runx1t1 | other | upstream | 1493686 | 70192261 ~ 70385585 (+) |
| G1577699 | NA | other | upstream | 2028558 | 69762713 ~ 69764253 (+) |
| G1577567 | NA | other | upstream | 2176468 | 69615279 ~ 69616967 (+) |
| si:ch211-215i13.3 | LOC106589127 | other | upstream | 2417894 | 69360411 ~ 69374917 (+) |
| G1579579 | NA | other | downstream | 343253 | 72138157 ~ 72138592 (+) |
| G1579615 | NA | other | downstream | 432427 | 72227331 ~ 72227659 (+) |
| G1579986 | NA | other | downstream | 467512 | 72262416 ~ 72263220 (+) |
| G1580222 | NA | other | downstream | 801160 | 72596064 ~ 72596671 (+) |
