Gene
RNA
| Item | Value |
|---|---|
| gene id | G1579440 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 71800364 ~ 71801566 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1807605 | False | 447 | lncRNA | 0.43 | 2 | 71800364 | 71800862 |
| TU1807608 | True | 617 | lncRNA | 0.41 | 3 | 71800364 | 71801566 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118940973 | NA | coding | upstream | 590721 | 71208388 ~ 71209643 (+) |
| LOC118941014 | NA | coding | upstream | 741209 | 71058367 ~ 71059155 (+) |
| LOC110515436 | LOC106570762 | coding | upstream | 847569 | 70857223 ~ 70952795 (+) |
| acot13 | acot13 | coding | upstream | 1023012 | 70774594 ~ 70777352 (+) |
| LOC118941216 | NA | coding | upstream | 1036690 | 70760086 ~ 70763674 (+) |
| LOC118941017 | NA | coding | downstream | 142676 | 71944242 ~ 71946176 (+) |
| LOC118941219 | LOC103143335 | coding | downstream | 1091288 | 72892854 ~ 72909233 (+) |
| yars1 | yars | coding | downstream | 1204330 | 73005896 ~ 73016843 (+) |
| sync | sync | coding | downstream | 1329233 | 73130799 ~ 73174920 (+) |
| LOC110496903 | LOC106570720 | coding | downstream | 1400233 | 73201799 ~ 73281251 (+) |
| G1579435 | NA | non-coding | upstream | 5460 | 71792811 ~ 71794904 (+) |
| G1579422 | NA | non-coding | upstream | 45367 | 71752067 ~ 71754997 (+) |
| G1579414 | NA | non-coding | upstream | 67236 | 71732007 ~ 71733128 (+) |
| G1579398 | NA | non-coding | upstream | 99265 | 71700619 ~ 71701099 (+) |
| G1579386 | NA | non-coding | upstream | 140875 | 71659254 ~ 71659489 (+) |
| G1579445 | NA | non-coding | downstream | 20001 | 71821567 ~ 71822020 (+) |
| G1579467 | NA | non-coding | downstream | 56031 | 71857597 ~ 71858361 (+) |
| G1579472 | NA | non-coding | downstream | 73916 | 71875482 ~ 71875953 (+) |
| G1579477 | NA | non-coding | downstream | 94172 | 71895738 ~ 71901190 (+) |
| G1579479 | NA | non-coding | downstream | 109810 | 71911376 ~ 71911611 (+) |
| G1578630 | NA | other | upstream | 1381091 | 70418859 ~ 70419273 (+) |
| LOC110519153 | runx1t1 | other | upstream | 1501239 | 70192261 ~ 70385585 (+) |
| G1577699 | NA | other | upstream | 2036111 | 69762713 ~ 69764253 (+) |
| G1577567 | NA | other | upstream | 2184021 | 69615279 ~ 69616967 (+) |
| si:ch211-215i13.3 | LOC106589127 | other | upstream | 2425447 | 69360411 ~ 69374917 (+) |
| G1579579 | NA | other | downstream | 336591 | 72138157 ~ 72138592 (+) |
| G1579615 | NA | other | downstream | 425765 | 72227331 ~ 72227659 (+) |
| G1579986 | NA | other | downstream | 460850 | 72262416 ~ 72263220 (+) |
| G1580222 | NA | other | downstream | 794498 | 72596064 ~ 72596671 (+) |
