G1579445


Basic Information

Item Value
gene id G1579445
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 71821567 ~ 71822020 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1807614
ataatggttggatcagataTAGAAGGCTTGGATCAAGACATaaataatggttggatcagataTAGAAGGCTGGGATCAAGACATaaataatggttggatcagataTAGAAGGCTGGGATCAAGACATAAATAATGGTTGGATCAGGTATAGAAGGCTGGGATCAAGACATGAAGAATGGATGGATCAGATATAGAAGGCTGGGATCAAGACATGAAGAATGGATGGATCAGATATAGAAGGCTGGGATCAAGACATGAAGAATGGATGGATCAGATATAGAAGGCTGGGATCAAGACATGAAGAATGGATGGATCAGATATAGAAGGCTGGGATCAAGACATGAAGAATGGATGGATCAGGTATAGAAGGCTGGGATCATGACATGAAGAATGGATGGATCAGGTATAGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1807614 True 412 lncRNA 0.40 2 71821567 71822020

Neighbor

gene id symbol gene type direction distance location
LOC118940973 NA coding upstream 611924 71208388 ~ 71209643 (+)
LOC118941014 NA coding upstream 762412 71058367 ~ 71059155 (+)
LOC110515436 LOC106570762 coding upstream 868772 70857223 ~ 70952795 (+)
acot13 acot13 coding upstream 1044215 70774594 ~ 70777352 (+)
LOC118941216 NA coding upstream 1057893 70760086 ~ 70763674 (+)
LOC118941017 NA coding downstream 122222 71944242 ~ 71946176 (+)
LOC118941219 LOC103143335 coding downstream 1070834 72892854 ~ 72909233 (+)
yars1 yars coding downstream 1183876 73005896 ~ 73016843 (+)
sync sync coding downstream 1308779 73130799 ~ 73174920 (+)
LOC110496903 LOC106570720 coding downstream 1379779 73201799 ~ 73281251 (+)
G1579440 NA non-coding upstream 20001 71800364 ~ 71801566 (+)
G1579435 NA non-coding upstream 26663 71792811 ~ 71794904 (+)
G1579422 NA non-coding upstream 66570 71752067 ~ 71754997 (+)
G1579414 NA non-coding upstream 88439 71732007 ~ 71733128 (+)
G1579398 NA non-coding upstream 120468 71700619 ~ 71701099 (+)
G1579467 NA non-coding downstream 35577 71857597 ~ 71858361 (+)
G1579472 NA non-coding downstream 53462 71875482 ~ 71875953 (+)
G1579477 NA non-coding downstream 73718 71895738 ~ 71901190 (+)
G1579479 NA non-coding downstream 89356 71911376 ~ 71911611 (+)
G1579481 NA non-coding downstream 90895 71912915 ~ 71916167 (+)
G1578630 NA other upstream 1402294 70418859 ~ 70419273 (+)
LOC110519153 runx1t1 other upstream 1522442 70192261 ~ 70385585 (+)
G1577699 NA other upstream 2057314 69762713 ~ 69764253 (+)
G1577567 NA other upstream 2205224 69615279 ~ 69616967 (+)
si:ch211-215i13.3 LOC106589127 other upstream 2446650 69360411 ~ 69374917 (+)
G1579579 NA other downstream 316137 72138157 ~ 72138592 (+)
G1579615 NA other downstream 405311 72227331 ~ 72227659 (+)
G1579986 NA other downstream 440396 72262416 ~ 72263220 (+)
G1580222 NA other downstream 774044 72596064 ~ 72596671 (+)

Expression


Co-expression Network