G1579467


Basic Information

Item Value
gene id G1579467
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 71857597 ~ 71858361 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1807643
ATAGAGACggtactctgtctctctactttagtctgatacattcatctaatagagacgggactctgtctctctactttactctgatacattcatctaatagagacgggactctgtctctctctactttagtctactttagtctgatacattaatctaatagagacgggactctgtctctctctactttactctgatacattcatctaatagagacgggactctgtctctctctactttagtctgatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1807643 True 247 lncRNA 0.39 2 71857597 71858361

Neighbor

gene id symbol gene type direction distance location
LOC118940973 NA coding upstream 647954 71208388 ~ 71209643 (+)
LOC118941014 NA coding upstream 798442 71058367 ~ 71059155 (+)
LOC110515436 LOC106570762 coding upstream 904802 70857223 ~ 70952795 (+)
acot13 acot13 coding upstream 1080245 70774594 ~ 70777352 (+)
LOC118941216 NA coding upstream 1093923 70760086 ~ 70763674 (+)
LOC118941017 NA coding downstream 85881 71944242 ~ 71946176 (+)
LOC118941219 LOC103143335 coding downstream 1034493 72892854 ~ 72909233 (+)
yars1 yars coding downstream 1147535 73005896 ~ 73016843 (+)
sync sync coding downstream 1272438 73130799 ~ 73174920 (+)
LOC110496903 LOC106570720 coding downstream 1343438 73201799 ~ 73281251 (+)
G1579445 NA non-coding upstream 35577 71821567 ~ 71822020 (+)
G1579440 NA non-coding upstream 56031 71800364 ~ 71801566 (+)
G1579435 NA non-coding upstream 62693 71792811 ~ 71794904 (+)
G1579422 NA non-coding upstream 102600 71752067 ~ 71754997 (+)
G1579414 NA non-coding upstream 124469 71732007 ~ 71733128 (+)
G1579472 NA non-coding downstream 17121 71875482 ~ 71875953 (+)
G1579477 NA non-coding downstream 37377 71895738 ~ 71901190 (+)
G1579479 NA non-coding downstream 53015 71911376 ~ 71911611 (+)
G1579481 NA non-coding downstream 54554 71912915 ~ 71916167 (+)
G1579483 NA non-coding downstream 62966 71921327 ~ 71921558 (+)
G1578630 NA other upstream 1438324 70418859 ~ 70419273 (+)
LOC110519153 runx1t1 other upstream 1558472 70192261 ~ 70385585 (+)
G1577699 NA other upstream 2093344 69762713 ~ 69764253 (+)
G1577567 NA other upstream 2241254 69615279 ~ 69616967 (+)
si:ch211-215i13.3 LOC106589127 other upstream 2482680 69360411 ~ 69374917 (+)
G1579579 NA other downstream 279796 72138157 ~ 72138592 (+)
G1579615 NA other downstream 368970 72227331 ~ 72227659 (+)
G1579986 NA other downstream 404055 72262416 ~ 72263220 (+)
G1580222 NA other downstream 737703 72596064 ~ 72596671 (+)

Expression


Co-expression Network