G1579479


Basic Information

Item Value
gene id G1579479
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 71911376 ~ 71911611 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1807657
tccttctccttcttatCCTTCTCCTTAtcatccttcttctccttctccttcttcttctccttcttcttcttcttctccttctccttcttcttccccttatcatccttcttctccttctccttctcttcttcctcttctccttcttcttctccttctccttcttcttcttcttctccttctccttcttcttctccttctcattctccttcttcttctccttcttcttctccttctcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1807657 True 236 lncRNA 0.43 1 71911376 71911611

Neighbor

gene id symbol gene type direction distance location
LOC118940973 NA coding upstream 701733 71208388 ~ 71209643 (+)
LOC118941014 NA coding upstream 852221 71058367 ~ 71059155 (+)
LOC110515436 LOC106570762 coding upstream 958581 70857223 ~ 70952795 (+)
acot13 acot13 coding upstream 1134024 70774594 ~ 70777352 (+)
LOC118941216 NA coding upstream 1147702 70760086 ~ 70763674 (+)
LOC118941017 NA coding downstream 32631 71944242 ~ 71946176 (+)
LOC118941219 LOC103143335 coding downstream 981243 72892854 ~ 72909233 (+)
yars1 yars coding downstream 1094285 73005896 ~ 73016843 (+)
sync sync coding downstream 1219188 73130799 ~ 73174920 (+)
LOC110496903 LOC106570720 coding downstream 1290188 73201799 ~ 73281251 (+)
G1579477 NA non-coding upstream 10186 71895738 ~ 71901190 (+)
G1579472 NA non-coding upstream 35423 71875482 ~ 71875953 (+)
G1579467 NA non-coding upstream 53015 71857597 ~ 71858361 (+)
G1579445 NA non-coding upstream 89356 71821567 ~ 71822020 (+)
G1579440 NA non-coding upstream 109810 71800364 ~ 71801566 (+)
G1579481 NA non-coding downstream 1304 71912915 ~ 71916167 (+)
G1579483 NA non-coding downstream 9716 71921327 ~ 71921558 (+)
G1579502 NA non-coding downstream 59126 71970737 ~ 71971535 (+)
G1579505 NA non-coding downstream 72261 71983872 ~ 71984145 (+)
G1579511 NA non-coding downstream 94636 72006247 ~ 72007776 (+)
G1578630 NA other upstream 1492103 70418859 ~ 70419273 (+)
LOC110519153 runx1t1 other upstream 1612251 70192261 ~ 70385585 (+)
G1577699 NA other upstream 2147123 69762713 ~ 69764253 (+)
G1577567 NA other upstream 2295033 69615279 ~ 69616967 (+)
si:ch211-215i13.3 LOC106589127 other upstream 2536459 69360411 ~ 69374917 (+)
G1579579 NA other downstream 226546 72138157 ~ 72138592 (+)
G1579615 NA other downstream 315720 72227331 ~ 72227659 (+)
G1579986 NA other downstream 350805 72262416 ~ 72263220 (+)
G1580222 NA other downstream 684453 72596064 ~ 72596671 (+)

Expression


Co-expression Network