Gene
RNA
| Item | Value |
|---|---|
| gene id | G1579827 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 71928312 ~ 71928788 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1808083 | True | 261 | lncRNA | 0.59 | 2 | 71928312 | 71928788 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941015 | LOC103363662 | coding | downstream | 53642 | 71847433 ~ 71874670 (-) |
| LOC118941218 | LOC106589160 | coding | downstream | 107200 | 71804321 ~ 71821112 (-) |
| LOC110518582 | csmd2 | coding | downstream | 148771 | 71321529 ~ 71779541 (-) |
| LOC110496779 | LOC106589151 | coding | downstream | 1138641 | 70776718 ~ 70789671 (-) |
| LOC118941215 | NA | coding | downstream | 1193511 | 70733633 ~ 70735514 (-) |
| LOC118941016 | NA | coding | upstream | 14440 | 71943228 ~ 71944243 (-) |
| csmd1a | csmd2 | coding | upstream | 87133 | 72015921 ~ 72236753 (-) |
| LOC110496752 | LOC106589094 | coding | upstream | 1090008 | 73006005 ~ 73131439 (-) |
| LOC118941220 | NA | coding | upstream | 1150616 | 73079404 ~ 73081896 (-) |
| LOC110517586 | LOC106589098 | coding | upstream | 1375583 | 73304371 ~ 73363731 (-) |
| G1579811 | NA | non-coding | downstream | 36504 | 71891064 ~ 71891808 (-) |
| G1579799 | NA | non-coding | downstream | 69943 | 71857597 ~ 71858369 (-) |
| G1579797 | NA | non-coding | downstream | 75462 | 71851973 ~ 71852850 (-) |
| G1579781 | NA | non-coding | downstream | 126748 | 71801077 ~ 71801564 (-) |
| G1579762 | NA | non-coding | downstream | 164340 | 71763683 ~ 71763972 (-) |
| G1579830 | NA | non-coding | upstream | 6664 | 71935452 ~ 71935657 (-) |
| G1579831 | NA | non-coding | upstream | 7692 | 71936480 ~ 71937758 (-) |
| G1579854 | NA | non-coding | upstream | 77935 | 72006723 ~ 72009799 (-) |
| G1579855 | NA | non-coding | upstream | 87640 | 72016428 ~ 72018818 (-) |
| G1579878 | NA | non-coding | upstream | 127173 | 72055961 ~ 72056514 (-) |
| G1579715 | NA | other | downstream | 290180 | 71636487 ~ 71638132 (-) |
| G1579672 | NA | other | downstream | 409843 | 71517869 ~ 71518469 (-) |
| G1579220 | NA | other | downstream | 685219 | 71242691 ~ 71243093 (-) |
| G1579147 | NA | other | downstream | 774035 | 71153837 ~ 71154277 (-) |
| G1579954 | NA | other | upstream | 285386 | 72214174 ~ 72214789 (-) |
| G1580625 | NA | other | upstream | 1119045 | 73047833 ~ 73048686 (-) |
| G1580844 | NA | other | upstream | 1596494 | 73525282 ~ 73525595 (-) |
| LOC110496905 | LOC106593151 | other | upstream | 1895243 | 73822008 ~ 74115567 (-) |
