Gene
RNA
| Item | Value |
|---|---|
| gene id | G1579830 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 71935452 ~ 71935657 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1808086 | True | 206 | lncRNA | 0.54 | 1 | 71935452 | 71935657 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941015 | LOC103363662 | coding | downstream | 60782 | 71847433 ~ 71874670 (-) |
| LOC118941218 | LOC106589160 | coding | downstream | 114340 | 71804321 ~ 71821112 (-) |
| LOC110518582 | csmd2 | coding | downstream | 155911 | 71321529 ~ 71779541 (-) |
| LOC110496779 | LOC106589151 | coding | downstream | 1145781 | 70776718 ~ 70789671 (-) |
| LOC118941215 | NA | coding | downstream | 1200651 | 70733633 ~ 70735514 (-) |
| LOC118941016 | NA | coding | upstream | 7571 | 71943228 ~ 71944243 (-) |
| csmd1a | csmd2 | coding | upstream | 80264 | 72015921 ~ 72236753 (-) |
| LOC110496752 | LOC106589094 | coding | upstream | 1083139 | 73006005 ~ 73131439 (-) |
| LOC118941220 | NA | coding | upstream | 1143747 | 73079404 ~ 73081896 (-) |
| LOC110517586 | LOC106589098 | coding | upstream | 1368714 | 73304371 ~ 73363731 (-) |
| G1579827 | NA | non-coding | downstream | 6664 | 71928312 ~ 71928788 (-) |
| G1579811 | NA | non-coding | downstream | 43644 | 71891064 ~ 71891808 (-) |
| G1579799 | NA | non-coding | downstream | 77083 | 71857597 ~ 71858369 (-) |
| G1579797 | NA | non-coding | downstream | 82602 | 71851973 ~ 71852850 (-) |
| G1579781 | NA | non-coding | downstream | 133888 | 71801077 ~ 71801564 (-) |
| G1579831 | NA | non-coding | upstream | 823 | 71936480 ~ 71937758 (-) |
| G1579854 | NA | non-coding | upstream | 71066 | 72006723 ~ 72009799 (-) |
| G1579855 | NA | non-coding | upstream | 80771 | 72016428 ~ 72018818 (-) |
| G1579878 | NA | non-coding | upstream | 120304 | 72055961 ~ 72056514 (-) |
| G1579879 | NA | non-coding | upstream | 121445 | 72057102 ~ 72057334 (-) |
| G1579715 | NA | other | downstream | 297320 | 71636487 ~ 71638132 (-) |
| G1579672 | NA | other | downstream | 416983 | 71517869 ~ 71518469 (-) |
| G1579220 | NA | other | downstream | 692359 | 71242691 ~ 71243093 (-) |
| G1579147 | NA | other | downstream | 781175 | 71153837 ~ 71154277 (-) |
| G1579954 | NA | other | upstream | 278517 | 72214174 ~ 72214789 (-) |
| G1580625 | NA | other | upstream | 1112176 | 73047833 ~ 73048686 (-) |
| G1580844 | NA | other | upstream | 1589625 | 73525282 ~ 73525595 (-) |
| LOC110496905 | LOC106593151 | other | upstream | 1888374 | 73822008 ~ 74115567 (-) |
