G1579502


Basic Information

Item Value
gene id G1579502
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 71970737 ~ 71971535 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1807684
GGCCATAACctctactacactataatactaCAGACACTATGATACTGCAAAGATAGGTATCAATGTTACAAATCAATGTGACATATCAATGTGACATATCAATGGATATCAATGTGACATGTCAATGTGACATATCAATGTAACATATCAATGTGACATATCAATGTGACATATCAATGTGACATATCAATGTGACATATCAATGTGACATATCAATGGATATCAATGTAACATATCAATGTGACATATCAATGTGACATATCAATGTGACATATCAATGTGACATATCAATGTGACATATCAATGTGACATATCAATGTGACATATCAATGTAACATATCGATGTAACATATCAATGTGACATATCAATGTGACATATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1807684 True 381 lncRNA 0.31 4 71970737 71971535

Neighbor

gene id symbol gene type direction distance location
LOC118941017 NA coding upstream 24561 71944242 ~ 71946176 (+)
LOC118940973 NA coding upstream 761094 71208388 ~ 71209643 (+)
LOC118941014 NA coding upstream 911582 71058367 ~ 71059155 (+)
LOC110515436 LOC106570762 coding upstream 1017942 70857223 ~ 70952795 (+)
acot13 acot13 coding upstream 1193385 70774594 ~ 70777352 (+)
LOC118941219 LOC103143335 coding downstream 921319 72892854 ~ 72909233 (+)
yars1 yars coding downstream 1034361 73005896 ~ 73016843 (+)
sync sync coding downstream 1159264 73130799 ~ 73174920 (+)
LOC110496903 LOC106570720 coding downstream 1230264 73201799 ~ 73281251 (+)
LOC110496759 nupl2 coding downstream 1424910 73396445 ~ 73418514 (+)
G1579483 NA non-coding upstream 49179 71921327 ~ 71921558 (+)
G1579481 NA non-coding upstream 54570 71912915 ~ 71916167 (+)
G1579479 NA non-coding upstream 59126 71911376 ~ 71911611 (+)
G1579477 NA non-coding upstream 69547 71895738 ~ 71901190 (+)
G1579472 NA non-coding upstream 94784 71875482 ~ 71875953 (+)
G1579505 NA non-coding downstream 12337 71983872 ~ 71984145 (+)
G1579511 NA non-coding downstream 34712 72006247 ~ 72007776 (+)
G1579516 NA non-coding downstream 45669 72017204 ~ 72018857 (+)
G1579533 NA non-coding downstream 79221 72050756 ~ 72050985 (+)
G1579539 NA non-coding downstream 85492 72057027 ~ 72057232 (+)
G1578630 NA other upstream 1551464 70418859 ~ 70419273 (+)
LOC110519153 runx1t1 other upstream 1671612 70192261 ~ 70385585 (+)
G1577699 NA other upstream 2206484 69762713 ~ 69764253 (+)
G1577567 NA other upstream 2354394 69615279 ~ 69616967 (+)
si:ch211-215i13.3 LOC106589127 other upstream 2595820 69360411 ~ 69374917 (+)
G1579579 NA other downstream 166622 72138157 ~ 72138592 (+)
G1579615 NA other downstream 255796 72227331 ~ 72227659 (+)
G1579986 NA other downstream 290881 72262416 ~ 72263220 (+)
G1580222 NA other downstream 624529 72596064 ~ 72596671 (+)

Expression


Co-expression Network