G1579935


Basic Information

Item Value
gene id G1579935
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 72158623 ~ 72159220 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1808210
AGCATCGTTAGAATAGCATCACACATTCGTTAGAATAGCATCGATAGAATAGCATCACACATTCGTTAGAATAGCATCGTTAGAATAGCATCGTTAGAATAGCATCGTTAGAATAGCATCACACATTCGTTAGAATAGCATCGTTAGAATAGCATCGTAAGAATAGCATCGTTAGAATAGCATCACACATTTGTTAGAATAGCATCGTTAGAATAGCATTGATAGAATAGCATCACACATTCGTTAGAATAGCATCGTTAGAATAGCATCGTTAGAATAGCATCACACATTTGTTAGAATAGCATCATTAGAATAGCATCGATAGAATAGCATCACACATTCGTTAGAATAGCATCGTTAGAATAGCATCACACATTCGTTAGAATAGCATTGATAGAATAGCATCACACATTCGTTAGAATAGCATCGTTAGAATAGCATCGTTAGAATAGCATCGTTAGAATAGCATCACACATTCGTTAGAATAGCATCGTTAGAATAGCATCACACATTCGTTAGAATAGCATCGATAGAATAGCATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1808210 True 542 lncRNA 0.35 2 72158623 72159220

Neighbor

gene id symbol gene type direction distance location
LOC118941016 NA coding downstream 214380 71943228 ~ 71944243 (-)
LOC118941015 LOC103363662 coding downstream 283953 71847433 ~ 71874670 (-)
LOC118941218 LOC106589160 coding downstream 337511 71804321 ~ 71821112 (-)
LOC110518582 csmd2 coding downstream 379082 71321529 ~ 71779541 (-)
LOC110496779 LOC106589151 coding downstream 1368952 70776718 ~ 70789671 (-)
LOC110496752 LOC106589094 coding upstream 859576 73006005 ~ 73131439 (-)
LOC118941220 NA coding upstream 920184 73079404 ~ 73081896 (-)
LOC110517586 LOC106589098 coding upstream 1145151 73304371 ~ 73363731 (-)
LOC110496760 NA coding upstream 1229541 73388761 ~ 73393698 (-)
LOC110496758 LOC106530873 coding upstream 1274495 73433715 ~ 73445162 (-)
G1579919 NA non-coding downstream 18736 72139654 ~ 72139887 (-)
G1579916 NA non-coding downstream 20222 72138202 ~ 72138401 (-)
G1579915 NA non-coding downstream 26605 72131814 ~ 72132018 (-)
G1579901 NA non-coding downstream 54934 72102637 ~ 72103689 (-)
G1579879 NA non-coding downstream 101289 72057102 ~ 72057334 (-)
G1579937 NA non-coding upstream 9292 72168512 ~ 72186240 (-)
G1579952 NA non-coding upstream 50993 72210213 ~ 72210472 (-)
G1579953 NA non-coding upstream 54501 72213721 ~ 72213920 (-)
G1579957 NA non-coding upstream 65540 72224760 ~ 72225403 (-)
G1579959 NA non-coding upstream 68897 72228117 ~ 72228436 (-)
G1579715 NA other downstream 520491 71636487 ~ 71638132 (-)
G1579672 NA other downstream 640154 71517869 ~ 71518469 (-)
G1579220 NA other downstream 915530 71242691 ~ 71243093 (-)
G1579147 NA other downstream 1004346 71153837 ~ 71154277 (-)
G1579954 NA other upstream 54954 72214174 ~ 72214789 (-)
G1580625 NA other upstream 888613 73047833 ~ 73048686 (-)
G1580844 NA other upstream 1366062 73525282 ~ 73525595 (-)
LOC110496905 LOC106593151 other upstream 1664811 73822008 ~ 74115567 (-)

Expression


Co-expression Network