Gene
RNA
| Item | Value |
|---|---|
| gene id | G1579954 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 72214174 ~ 72214789 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: vegetative cell wall protein gp1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1808230 | True | 616 | TUCP | 0.56 | 1 | 72214174 | 72214789 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941016 | NA | coding | downstream | 269931 | 71943228 ~ 71944243 (-) |
| LOC118941015 | LOC103363662 | coding | downstream | 339504 | 71847433 ~ 71874670 (-) |
| LOC118941218 | LOC106589160 | coding | downstream | 393062 | 71804321 ~ 71821112 (-) |
| LOC110518582 | csmd2 | coding | downstream | 434633 | 71321529 ~ 71779541 (-) |
| LOC110496779 | LOC106589151 | coding | downstream | 1424503 | 70776718 ~ 70789671 (-) |
| LOC110496752 | LOC106589094 | coding | upstream | 804007 | 73006005 ~ 73131439 (-) |
| LOC118941220 | NA | coding | upstream | 864615 | 73079404 ~ 73081896 (-) |
| LOC110517586 | LOC106589098 | coding | upstream | 1089582 | 73304371 ~ 73363731 (-) |
| LOC110496760 | NA | coding | upstream | 1173972 | 73388761 ~ 73393698 (-) |
| LOC110496758 | LOC106530873 | coding | upstream | 1218926 | 73433715 ~ 73445162 (-) |
| G1579953 | NA | non-coding | downstream | 254 | 72213721 ~ 72213920 (-) |
| G1579952 | NA | non-coding | downstream | 3702 | 72210213 ~ 72210472 (-) |
| G1579937 | NA | non-coding | downstream | 27934 | 72168512 ~ 72186240 (-) |
| G1579935 | NA | non-coding | downstream | 54954 | 72158623 ~ 72159220 (-) |
| G1579919 | NA | non-coding | downstream | 74287 | 72139654 ~ 72139887 (-) |
| G1579957 | NA | non-coding | upstream | 9971 | 72224760 ~ 72225403 (-) |
| G1579959 | NA | non-coding | upstream | 13328 | 72228117 ~ 72228436 (-) |
| G1579961 | NA | non-coding | upstream | 15861 | 72230650 ~ 72230852 (-) |
| G1579979 | NA | non-coding | upstream | 39160 | 72253949 ~ 72254154 (-) |
| G1579982 | LOC106613263 | non-coding | upstream | 43827 | 72258616 ~ 72258841 (-) |
| G1579715 | NA | other | downstream | 576042 | 71636487 ~ 71638132 (-) |
| G1579672 | NA | other | downstream | 695705 | 71517869 ~ 71518469 (-) |
| G1579220 | NA | other | downstream | 971081 | 71242691 ~ 71243093 (-) |
| G1579147 | NA | other | downstream | 1059897 | 71153837 ~ 71154277 (-) |
| G1580625 | NA | other | upstream | 833044 | 73047833 ~ 73048686 (-) |
| G1580844 | NA | other | upstream | 1310493 | 73525282 ~ 73525595 (-) |
| LOC110496905 | LOC106593151 | other | upstream | 1609242 | 73822008 ~ 74115567 (-) |
| G1581344 | LOC106589111 | other | upstream | 1942516 | 74157305 ~ 74157747 (-) |
