Gene
RNA
| Item | Value |
|---|---|
| gene id | G1579987 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 72262769 ~ 72263093 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1808263 | True | 325 | lncRNA | 0.48 | 1 | 72262769 | 72263093 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| csmd1a | csmd2 | coding | downstream | 26016 | 72015921 ~ 72236753 (-) |
| LOC118941016 | NA | coding | downstream | 318526 | 71943228 ~ 71944243 (-) |
| LOC118941015 | LOC103363662 | coding | downstream | 388099 | 71847433 ~ 71874670 (-) |
| LOC118941218 | LOC106589160 | coding | downstream | 441657 | 71804321 ~ 71821112 (-) |
| LOC110518582 | csmd2 | coding | downstream | 483228 | 71321529 ~ 71779541 (-) |
| LOC110496752 | LOC106589094 | coding | upstream | 755703 | 73006005 ~ 73131439 (-) |
| LOC118941220 | NA | coding | upstream | 816311 | 73079404 ~ 73081896 (-) |
| LOC110517586 | LOC106589098 | coding | upstream | 1041278 | 73304371 ~ 73363731 (-) |
| LOC110496760 | NA | coding | upstream | 1125668 | 73388761 ~ 73393698 (-) |
| LOC110496758 | LOC106530873 | coding | upstream | 1170622 | 73433715 ~ 73445162 (-) |
| G1579982 | LOC106613263 | non-coding | downstream | 3928 | 72258616 ~ 72258841 (-) |
| G1579979 | NA | non-coding | downstream | 8615 | 72253949 ~ 72254154 (-) |
| G1579961 | NA | non-coding | downstream | 31917 | 72230650 ~ 72230852 (-) |
| G1579959 | NA | non-coding | downstream | 34333 | 72228117 ~ 72228436 (-) |
| G1579957 | NA | non-coding | downstream | 37366 | 72224760 ~ 72225403 (-) |
| G1579989 | NA | non-coding | upstream | 5274 | 72268367 ~ 72268587 (-) |
| G1580004 | NA | non-coding | upstream | 20506 | 72283599 ~ 72284055 (-) |
| G1580006 | NA | non-coding | upstream | 21991 | 72285084 ~ 72285315 (-) |
| G1580014 | NA | non-coding | upstream | 27527 | 72290620 ~ 72290972 (-) |
| G1580039 | NA | non-coding | upstream | 57938 | 72321031 ~ 72321421 (-) |
| G1579954 | NA | other | downstream | 47980 | 72214174 ~ 72214789 (-) |
| G1579715 | NA | other | downstream | 624637 | 71636487 ~ 71638132 (-) |
| G1579672 | NA | other | downstream | 744300 | 71517869 ~ 71518469 (-) |
| G1579220 | NA | other | downstream | 1019676 | 71242691 ~ 71243093 (-) |
| G1580625 | NA | other | upstream | 784740 | 73047833 ~ 73048686 (-) |
| G1580844 | NA | other | upstream | 1262189 | 73525282 ~ 73525595 (-) |
| LOC110496905 | LOC106593151 | other | upstream | 1560938 | 73822008 ~ 74115567 (-) |
| G1581344 | LOC106589111 | other | upstream | 1894212 | 74157305 ~ 74157747 (-) |
