Gene
RNA
| Item | Value |
|---|---|
| gene id | G1580006 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 72285084 ~ 72285315 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1808282 | True | 232 | lncRNA | 0.42 | 1 | 72285084 | 72285315 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| csmd1a | csmd2 | coding | downstream | 48331 | 72015921 ~ 72236753 (-) |
| LOC118941016 | NA | coding | downstream | 340841 | 71943228 ~ 71944243 (-) |
| LOC118941015 | LOC103363662 | coding | downstream | 410414 | 71847433 ~ 71874670 (-) |
| LOC118941218 | LOC106589160 | coding | downstream | 463972 | 71804321 ~ 71821112 (-) |
| LOC110518582 | csmd2 | coding | downstream | 505543 | 71321529 ~ 71779541 (-) |
| LOC110496752 | LOC106589094 | coding | upstream | 733481 | 73006005 ~ 73131439 (-) |
| LOC118941220 | NA | coding | upstream | 794089 | 73079404 ~ 73081896 (-) |
| LOC110517586 | LOC106589098 | coding | upstream | 1019056 | 73304371 ~ 73363731 (-) |
| LOC110496760 | NA | coding | upstream | 1103446 | 73388761 ~ 73393698 (-) |
| LOC110496758 | LOC106530873 | coding | upstream | 1148400 | 73433715 ~ 73445162 (-) |
| G1580004 | NA | non-coding | downstream | 1029 | 72283599 ~ 72284055 (-) |
| G1579989 | NA | non-coding | downstream | 16497 | 72268367 ~ 72268587 (-) |
| G1579987 | NA | non-coding | downstream | 21991 | 72262769 ~ 72263093 (-) |
| G1579982 | LOC106613263 | non-coding | downstream | 26243 | 72258616 ~ 72258841 (-) |
| G1579979 | NA | non-coding | downstream | 30930 | 72253949 ~ 72254154 (-) |
| G1580014 | NA | non-coding | upstream | 5305 | 72290620 ~ 72290972 (-) |
| G1580039 | NA | non-coding | upstream | 35716 | 72321031 ~ 72321421 (-) |
| G1580048 | NA | non-coding | upstream | 43305 | 72328620 ~ 72328904 (-) |
| G1580075 | NA | non-coding | upstream | 82788 | 72368103 ~ 72368310 (-) |
| G1580085 | NA | non-coding | upstream | 89821 | 72375136 ~ 72375814 (-) |
| G1579954 | NA | other | downstream | 70295 | 72214174 ~ 72214789 (-) |
| G1579715 | NA | other | downstream | 646952 | 71636487 ~ 71638132 (-) |
| G1579672 | NA | other | downstream | 766615 | 71517869 ~ 71518469 (-) |
| G1579220 | NA | other | downstream | 1041991 | 71242691 ~ 71243093 (-) |
| G1580625 | NA | other | upstream | 762518 | 73047833 ~ 73048686 (-) |
| G1580844 | NA | other | upstream | 1239967 | 73525282 ~ 73525595 (-) |
| LOC110496905 | LOC106593151 | other | upstream | 1538716 | 73822008 ~ 74115567 (-) |
| G1581344 | LOC106589111 | other | upstream | 1871990 | 74157305 ~ 74157747 (-) |
