Gene
RNA
| Item | Value |
|---|---|
| gene id | G1580039 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 72321031 ~ 72321421 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1808326 | True | 391 | lncRNA | 0.38 | 1 | 72321031 | 72321421 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| csmd1a | csmd2 | coding | downstream | 84278 | 72015921 ~ 72236753 (-) |
| LOC118941016 | NA | coding | downstream | 376788 | 71943228 ~ 71944243 (-) |
| LOC118941015 | LOC103363662 | coding | downstream | 446361 | 71847433 ~ 71874670 (-) |
| LOC118941218 | LOC106589160 | coding | downstream | 499919 | 71804321 ~ 71821112 (-) |
| LOC110518582 | csmd2 | coding | downstream | 541490 | 71321529 ~ 71779541 (-) |
| LOC110496752 | LOC106589094 | coding | upstream | 697375 | 73006005 ~ 73131439 (-) |
| LOC118941220 | NA | coding | upstream | 757983 | 73079404 ~ 73081896 (-) |
| LOC110517586 | LOC106589098 | coding | upstream | 982950 | 73304371 ~ 73363731 (-) |
| LOC110496760 | NA | coding | upstream | 1067340 | 73388761 ~ 73393698 (-) |
| LOC110496758 | LOC106530873 | coding | upstream | 1112294 | 73433715 ~ 73445162 (-) |
| G1580014 | NA | non-coding | downstream | 30059 | 72290620 ~ 72290972 (-) |
| G1580006 | NA | non-coding | downstream | 35716 | 72285084 ~ 72285315 (-) |
| G1580004 | NA | non-coding | downstream | 36976 | 72283599 ~ 72284055 (-) |
| G1579989 | NA | non-coding | downstream | 52444 | 72268367 ~ 72268587 (-) |
| G1579987 | NA | non-coding | downstream | 57938 | 72262769 ~ 72263093 (-) |
| G1580048 | NA | non-coding | upstream | 7199 | 72328620 ~ 72328904 (-) |
| G1580075 | NA | non-coding | upstream | 46682 | 72368103 ~ 72368310 (-) |
| G1580085 | NA | non-coding | upstream | 53715 | 72375136 ~ 72375814 (-) |
| G1580102 | NA | non-coding | upstream | 75689 | 72397110 ~ 72397348 (-) |
| G1580106 | NA | non-coding | upstream | 79200 | 72400621 ~ 72401118 (-) |
| G1579954 | NA | other | downstream | 106242 | 72214174 ~ 72214789 (-) |
| G1579715 | NA | other | downstream | 682899 | 71636487 ~ 71638132 (-) |
| G1579672 | NA | other | downstream | 802562 | 71517869 ~ 71518469 (-) |
| G1579220 | NA | other | downstream | 1077938 | 71242691 ~ 71243093 (-) |
| G1580625 | NA | other | upstream | 726412 | 73047833 ~ 73048686 (-) |
| G1580844 | NA | other | upstream | 1203861 | 73525282 ~ 73525595 (-) |
| LOC110496905 | LOC106593151 | other | upstream | 1502610 | 73822008 ~ 74115567 (-) |
| G1581344 | LOC106589111 | other | upstream | 1835884 | 74157305 ~ 74157747 (-) |
