Gene
RNA
| Item | Value |
|---|---|
| gene id | G1580127 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 72418524 ~ 72418824 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1808418 | True | 301 | lncRNA | 0.45 | 1 | 72418524 | 72418824 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| csmd1a | csmd2 | coding | downstream | 181771 | 72015921 ~ 72236753 (-) |
| LOC118941016 | NA | coding | downstream | 474281 | 71943228 ~ 71944243 (-) |
| LOC118941015 | LOC103363662 | coding | downstream | 543854 | 71847433 ~ 71874670 (-) |
| LOC118941218 | LOC106589160 | coding | downstream | 597412 | 71804321 ~ 71821112 (-) |
| LOC110518582 | csmd2 | coding | downstream | 638983 | 71321529 ~ 71779541 (-) |
| LOC110496752 | LOC106589094 | coding | upstream | 599972 | 73006005 ~ 73131439 (-) |
| LOC118941220 | NA | coding | upstream | 660580 | 73079404 ~ 73081896 (-) |
| LOC110517586 | LOC106589098 | coding | upstream | 885547 | 73304371 ~ 73363731 (-) |
| LOC110496760 | NA | coding | upstream | 969937 | 73388761 ~ 73393698 (-) |
| LOC110496758 | LOC106530873 | coding | upstream | 1014891 | 73433715 ~ 73445162 (-) |
| G1580106 | NA | non-coding | downstream | 17406 | 72400621 ~ 72401118 (-) |
| G1580102 | NA | non-coding | downstream | 21176 | 72397110 ~ 72397348 (-) |
| G1580085 | NA | non-coding | downstream | 42710 | 72375136 ~ 72375814 (-) |
| G1580075 | NA | non-coding | downstream | 50214 | 72368103 ~ 72368310 (-) |
| G1580048 | NA | non-coding | downstream | 89620 | 72328620 ~ 72328904 (-) |
| G1580136 | NA | non-coding | upstream | 5208 | 72424032 ~ 72424402 (-) |
| G1580161 | NA | non-coding | upstream | 35584 | 72454408 ~ 72454609 (-) |
| G1580169 | NA | non-coding | upstream | 92892 | 72511716 ~ 72512378 (-) |
| G1580225 | NA | non-coding | upstream | 177943 | 72596767 ~ 72597368 (-) |
| G1580234 | NA | non-coding | upstream | 198804 | 72617628 ~ 72617858 (-) |
| G1579954 | NA | other | downstream | 203735 | 72214174 ~ 72214789 (-) |
| G1579715 | NA | other | downstream | 780392 | 71636487 ~ 71638132 (-) |
| G1579672 | NA | other | downstream | 900055 | 71517869 ~ 71518469 (-) |
| G1579220 | NA | other | downstream | 1175431 | 71242691 ~ 71243093 (-) |
| G1580625 | NA | other | upstream | 629009 | 73047833 ~ 73048686 (-) |
| G1580844 | NA | other | upstream | 1106458 | 73525282 ~ 73525595 (-) |
| LOC110496905 | LOC106593151 | other | upstream | 1405207 | 73822008 ~ 74115567 (-) |
| G1581344 | LOC106589111 | other | upstream | 1738481 | 74157305 ~ 74157747 (-) |
