Gene
RNA
| Item | Value |
|---|---|
| gene id | G1580136 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 72424032 ~ 72424402 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1808427 | True | 371 | lncRNA | 0.40 | 1 | 72424032 | 72424402 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| csmd1a | csmd2 | coding | downstream | 187279 | 72015921 ~ 72236753 (-) |
| LOC118941016 | NA | coding | downstream | 479789 | 71943228 ~ 71944243 (-) |
| LOC118941015 | LOC103363662 | coding | downstream | 549362 | 71847433 ~ 71874670 (-) |
| LOC118941218 | LOC106589160 | coding | downstream | 602920 | 71804321 ~ 71821112 (-) |
| LOC110518582 | csmd2 | coding | downstream | 644491 | 71321529 ~ 71779541 (-) |
| LOC110496752 | LOC106589094 | coding | upstream | 594394 | 73006005 ~ 73131439 (-) |
| LOC118941220 | NA | coding | upstream | 655002 | 73079404 ~ 73081896 (-) |
| LOC110517586 | LOC106589098 | coding | upstream | 879969 | 73304371 ~ 73363731 (-) |
| LOC110496760 | NA | coding | upstream | 964359 | 73388761 ~ 73393698 (-) |
| LOC110496758 | LOC106530873 | coding | upstream | 1009313 | 73433715 ~ 73445162 (-) |
| G1580127 | NA | non-coding | downstream | 5208 | 72418524 ~ 72418824 (-) |
| G1580106 | NA | non-coding | downstream | 22914 | 72400621 ~ 72401118 (-) |
| G1580102 | NA | non-coding | downstream | 26684 | 72397110 ~ 72397348 (-) |
| G1580085 | NA | non-coding | downstream | 48218 | 72375136 ~ 72375814 (-) |
| G1580075 | NA | non-coding | downstream | 55722 | 72368103 ~ 72368310 (-) |
| G1580161 | NA | non-coding | upstream | 30006 | 72454408 ~ 72454609 (-) |
| G1580169 | NA | non-coding | upstream | 87314 | 72511716 ~ 72512378 (-) |
| G1580225 | NA | non-coding | upstream | 172365 | 72596767 ~ 72597368 (-) |
| G1580234 | NA | non-coding | upstream | 193226 | 72617628 ~ 72617858 (-) |
| G1580242 | NA | non-coding | upstream | 200821 | 72625223 ~ 72625587 (-) |
| G1579954 | NA | other | downstream | 209243 | 72214174 ~ 72214789 (-) |
| G1579715 | NA | other | downstream | 785900 | 71636487 ~ 71638132 (-) |
| G1579672 | NA | other | downstream | 905563 | 71517869 ~ 71518469 (-) |
| G1579220 | NA | other | downstream | 1180939 | 71242691 ~ 71243093 (-) |
| G1580625 | NA | other | upstream | 623431 | 73047833 ~ 73048686 (-) |
| G1580844 | NA | other | upstream | 1100880 | 73525282 ~ 73525595 (-) |
| LOC110496905 | LOC106593151 | other | upstream | 1399629 | 73822008 ~ 74115567 (-) |
| G1581344 | LOC106589111 | other | upstream | 1732903 | 74157305 ~ 74157747 (-) |
