Gene
RNA
| Item | Value |
|---|---|
| gene id | G1580161 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 72454408 ~ 72454609 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1808458 | True | 202 | lncRNA | 0.55 | 1 | 72454408 | 72454609 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| csmd1a | csmd2 | coding | downstream | 217655 | 72015921 ~ 72236753 (-) |
| LOC118941016 | NA | coding | downstream | 510165 | 71943228 ~ 71944243 (-) |
| LOC118941015 | LOC103363662 | coding | downstream | 579738 | 71847433 ~ 71874670 (-) |
| LOC118941218 | LOC106589160 | coding | downstream | 633296 | 71804321 ~ 71821112 (-) |
| LOC110518582 | csmd2 | coding | downstream | 674867 | 71321529 ~ 71779541 (-) |
| LOC110496752 | LOC106589094 | coding | upstream | 564187 | 73006005 ~ 73131439 (-) |
| LOC118941220 | NA | coding | upstream | 624795 | 73079404 ~ 73081896 (-) |
| LOC110517586 | LOC106589098 | coding | upstream | 849762 | 73304371 ~ 73363731 (-) |
| LOC110496760 | NA | coding | upstream | 934152 | 73388761 ~ 73393698 (-) |
| LOC110496758 | LOC106530873 | coding | upstream | 979106 | 73433715 ~ 73445162 (-) |
| G1580136 | NA | non-coding | downstream | 30006 | 72424032 ~ 72424402 (-) |
| G1580127 | NA | non-coding | downstream | 35584 | 72418524 ~ 72418824 (-) |
| G1580106 | NA | non-coding | downstream | 53290 | 72400621 ~ 72401118 (-) |
| G1580102 | NA | non-coding | downstream | 57060 | 72397110 ~ 72397348 (-) |
| G1580085 | NA | non-coding | downstream | 78594 | 72375136 ~ 72375814 (-) |
| G1580169 | NA | non-coding | upstream | 57107 | 72511716 ~ 72512378 (-) |
| G1580225 | NA | non-coding | upstream | 142158 | 72596767 ~ 72597368 (-) |
| G1580234 | NA | non-coding | upstream | 163019 | 72617628 ~ 72617858 (-) |
| G1580242 | NA | non-coding | upstream | 170614 | 72625223 ~ 72625587 (-) |
| G1580243 | NA | non-coding | upstream | 171297 | 72625906 ~ 72626114 (-) |
| G1579954 | NA | other | downstream | 239619 | 72214174 ~ 72214789 (-) |
| G1579715 | NA | other | downstream | 816276 | 71636487 ~ 71638132 (-) |
| G1579672 | NA | other | downstream | 935939 | 71517869 ~ 71518469 (-) |
| G1579220 | NA | other | downstream | 1211315 | 71242691 ~ 71243093 (-) |
| G1580625 | NA | other | upstream | 593224 | 73047833 ~ 73048686 (-) |
| G1580844 | NA | other | upstream | 1070673 | 73525282 ~ 73525595 (-) |
| LOC110496905 | LOC106593151 | other | upstream | 1369422 | 73822008 ~ 74115567 (-) |
| G1581344 | LOC106589111 | other | upstream | 1702696 | 74157305 ~ 74157747 (-) |
