Gene
RNA
| Item | Value |
|---|---|
| gene id | G1580243 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 72625906 ~ 72626114 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1808556 | True | 209 | lncRNA | 0.48 | 1 | 72625906 | 72626114 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| csmd1a | csmd2 | coding | downstream | 389153 | 72015921 ~ 72236753 (-) |
| LOC118941016 | NA | coding | downstream | 681663 | 71943228 ~ 71944243 (-) |
| LOC118941015 | LOC103363662 | coding | downstream | 751236 | 71847433 ~ 71874670 (-) |
| LOC118941218 | LOC106589160 | coding | downstream | 804794 | 71804321 ~ 71821112 (-) |
| LOC110518582 | csmd2 | coding | downstream | 846365 | 71321529 ~ 71779541 (-) |
| LOC110496752 | LOC106589094 | coding | upstream | 392682 | 73006005 ~ 73131439 (-) |
| LOC118941220 | NA | coding | upstream | 453290 | 73079404 ~ 73081896 (-) |
| LOC110517586 | LOC106589098 | coding | upstream | 678257 | 73304371 ~ 73363731 (-) |
| LOC110496760 | NA | coding | upstream | 762647 | 73388761 ~ 73393698 (-) |
| LOC110496758 | LOC106530873 | coding | upstream | 807601 | 73433715 ~ 73445162 (-) |
| G1580242 | NA | non-coding | downstream | 319 | 72625223 ~ 72625587 (-) |
| G1580234 | NA | non-coding | downstream | 8048 | 72617628 ~ 72617858 (-) |
| G1580225 | NA | non-coding | downstream | 28538 | 72596767 ~ 72597368 (-) |
| G1580169 | NA | non-coding | downstream | 113528 | 72511716 ~ 72512378 (-) |
| G1580161 | NA | non-coding | downstream | 171297 | 72454408 ~ 72454609 (-) |
| G1580253 | NA | non-coding | upstream | 11543 | 72637657 ~ 72638423 (-) |
| G1580263 | NA | non-coding | upstream | 23243 | 72649357 ~ 72651385 (-) |
| G1580264 | NA | non-coding | upstream | 26576 | 72652690 ~ 72653635 (-) |
| G1580268 | NA | non-coding | upstream | 32211 | 72658325 ~ 72658540 (-) |
| G1580271 | NA | non-coding | upstream | 33954 | 72660068 ~ 72661155 (-) |
| G1579954 | NA | other | downstream | 411117 | 72214174 ~ 72214789 (-) |
| G1579715 | NA | other | downstream | 987774 | 71636487 ~ 71638132 (-) |
| G1579672 | NA | other | downstream | 1107437 | 71517869 ~ 71518469 (-) |
| G1579220 | NA | other | downstream | 1382813 | 71242691 ~ 71243093 (-) |
| G1580625 | NA | other | upstream | 421719 | 73047833 ~ 73048686 (-) |
| G1580844 | NA | other | upstream | 899168 | 73525282 ~ 73525595 (-) |
| LOC110496905 | LOC106593151 | other | upstream | 1197917 | 73822008 ~ 74115567 (-) |
| G1581344 | LOC106589111 | other | upstream | 1531191 | 74157305 ~ 74157747 (-) |
