Gene
RNA
| Item | Value |
|---|---|
| gene id | G1580276 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 72669321 ~ 72669574 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1808591 | True | 254 | lncRNA | 0.53 | 1 | 72669321 | 72669574 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| csmd1a | csmd2 | coding | downstream | 432568 | 72015921 ~ 72236753 (-) |
| LOC118941016 | NA | coding | downstream | 725078 | 71943228 ~ 71944243 (-) |
| LOC118941015 | LOC103363662 | coding | downstream | 794651 | 71847433 ~ 71874670 (-) |
| LOC118941218 | LOC106589160 | coding | downstream | 848209 | 71804321 ~ 71821112 (-) |
| LOC110518582 | csmd2 | coding | downstream | 889780 | 71321529 ~ 71779541 (-) |
| LOC110496752 | LOC106589094 | coding | upstream | 349222 | 73006005 ~ 73131439 (-) |
| LOC118941220 | NA | coding | upstream | 409830 | 73079404 ~ 73081896 (-) |
| LOC110517586 | LOC106589098 | coding | upstream | 634797 | 73304371 ~ 73363731 (-) |
| LOC110496760 | NA | coding | upstream | 719187 | 73388761 ~ 73393698 (-) |
| LOC110496758 | LOC106530873 | coding | upstream | 764141 | 73433715 ~ 73445162 (-) |
| G1580271 | NA | non-coding | downstream | 8166 | 72660068 ~ 72661155 (-) |
| G1580268 | NA | non-coding | downstream | 10781 | 72658325 ~ 72658540 (-) |
| G1580264 | NA | non-coding | downstream | 15686 | 72652690 ~ 72653635 (-) |
| G1580263 | NA | non-coding | downstream | 17936 | 72649357 ~ 72651385 (-) |
| G1580253 | NA | non-coding | downstream | 30898 | 72637657 ~ 72638423 (-) |
| G1580304 | NA | non-coding | upstream | 38974 | 72708548 ~ 72717109 (-) |
| G1580310 | NA | non-coding | upstream | 51517 | 72721091 ~ 72721895 (-) |
| G1580320 | NA | non-coding | upstream | 65668 | 72735242 ~ 72735442 (-) |
| G1580323 | NA | non-coding | upstream | 70010 | 72739584 ~ 72739804 (-) |
| G1580330 | NA | non-coding | upstream | 83649 | 72753223 ~ 72753447 (-) |
| G1579954 | NA | other | downstream | 454532 | 72214174 ~ 72214789 (-) |
| G1579715 | NA | other | downstream | 1031189 | 71636487 ~ 71638132 (-) |
| G1579672 | NA | other | downstream | 1150852 | 71517869 ~ 71518469 (-) |
| G1579220 | NA | other | downstream | 1426228 | 71242691 ~ 71243093 (-) |
| G1580625 | NA | other | upstream | 378259 | 73047833 ~ 73048686 (-) |
| G1580844 | NA | other | upstream | 855708 | 73525282 ~ 73525595 (-) |
| LOC110496905 | LOC106593151 | other | upstream | 1154457 | 73822008 ~ 74115567 (-) |
| G1581344 | LOC106589111 | other | upstream | 1487731 | 74157305 ~ 74157747 (-) |
