Gene
RNA
| Item | Value |
|---|---|
| gene id | G1580787 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 73400248 ~ 73400493 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC105941010, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1809305 | True | 246 | lncRNA | 0.35 | 1 | 73400248 | 73400493 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496760 | NA | coding | downstream | 6550 | 73388761 ~ 73393698 (-) |
| LOC110517586 | LOC106589098 | coding | downstream | 36517 | 73304371 ~ 73363731 (-) |
| LOC110496752 | LOC106589094 | coding | downstream | 268809 | 73006005 ~ 73131439 (-) |
| LOC118941220 | NA | coding | downstream | 318352 | 73079404 ~ 73081896 (-) |
| csmd1a | csmd2 | coding | downstream | 1163495 | 72015921 ~ 72236753 (-) |
| LOC110496758 | LOC106530873 | coding | upstream | 33222 | 73433715 ~ 73445162 (-) |
| LOC110489356 | LOC106589108 | coding | upstream | 354871 | 73755364 ~ 73763523 (-) |
| LOC110496905 | LOC106593151 | coding | upstream | 421515 | 73822008 ~ 74115567 (-) |
| LOC110487813 | NA | coding | upstream | 908989 | 74309482 ~ 74331094 (-) |
| mc5ra | LOC106589114 | coding | upstream | 1017642 | 74418135 ~ 74437944 (-) |
| G1580785 | NA | non-coding | downstream | 3530 | 73396469 ~ 73396718 (-) |
| G1580752 | NA | non-coding | downstream | 16195 | 73383851 ~ 73384053 (-) |
| G1580748 | NA | non-coding | downstream | 18580 | 73381458 ~ 73381668 (-) |
| G1580747 | NA | non-coding | downstream | 19467 | 73380499 ~ 73380781 (-) |
| G1580745 | NA | non-coding | downstream | 21002 | 73378529 ~ 73379246 (-) |
| G1580788 | NA | non-coding | upstream | 2702 | 73403195 ~ 73419028 (-) |
| G1580791 | NA | non-coding | upstream | 18746 | 73419239 ~ 73424250 (-) |
| G1580792 | NA | non-coding | upstream | 27602 | 73428095 ~ 73428554 (-) |
| G1580793 | NA | non-coding | upstream | 28819 | 73429312 ~ 73429589 (-) |
| G1580794 | NA | non-coding | upstream | 29906 | 73430399 ~ 73430609 (-) |
| G1580625 | NA | other | downstream | 351562 | 73047833 ~ 73048686 (-) |
| G1579954 | NA | other | downstream | 1185459 | 72214174 ~ 72214789 (-) |
| G1579715 | NA | other | downstream | 1762116 | 71636487 ~ 71638132 (-) |
| G1579672 | NA | other | downstream | 1881779 | 71517869 ~ 71518469 (-) |
| G1580844 | NA | other | upstream | 124789 | 73525282 ~ 73525595 (-) |
| G1581344 | LOC106589111 | other | upstream | 756812 | 74157305 ~ 74157747 (-) |
| G1581465 | NA | other | upstream | 906285 | 74306778 ~ 74307678 (-) |
| G1581622 | NA | other | upstream | 1046103 | 74446596 ~ 74446989 (-) |
