Gene
RNA
| Item | Value |
|---|---|
| gene id | G1580792 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 73428095 ~ 73428554 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: voltage-dependent L-type calcium channel subunit alpha-1D-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1809321 | True | 350 | lncRNA | 0.39 | 2 | 73428095 | 73428554 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496760 | NA | coding | downstream | 34397 | 73388761 ~ 73393698 (-) |
| LOC110517586 | LOC106589098 | coding | downstream | 64364 | 73304371 ~ 73363731 (-) |
| LOC110496752 | LOC106589094 | coding | downstream | 296656 | 73006005 ~ 73131439 (-) |
| LOC118941220 | NA | coding | downstream | 346199 | 73079404 ~ 73081896 (-) |
| csmd1a | csmd2 | coding | downstream | 1191342 | 72015921 ~ 72236753 (-) |
| LOC110496758 | LOC106530873 | coding | upstream | 5161 | 73433715 ~ 73445162 (-) |
| LOC110489356 | LOC106589108 | coding | upstream | 326810 | 73755364 ~ 73763523 (-) |
| LOC110496905 | LOC106593151 | coding | upstream | 393454 | 73822008 ~ 74115567 (-) |
| LOC110487813 | NA | coding | upstream | 880928 | 74309482 ~ 74331094 (-) |
| mc5ra | LOC106589114 | coding | upstream | 989581 | 74418135 ~ 74437944 (-) |
| G1580791 | NA | non-coding | downstream | 3845 | 73419239 ~ 73424250 (-) |
| G1580788 | NA | non-coding | downstream | 9067 | 73403195 ~ 73419028 (-) |
| G1580787 | NA | non-coding | downstream | 27602 | 73400248 ~ 73400493 (-) |
| G1580785 | NA | non-coding | downstream | 31377 | 73396469 ~ 73396718 (-) |
| G1580752 | NA | non-coding | downstream | 44042 | 73383851 ~ 73384053 (-) |
| G1580793 | NA | non-coding | upstream | 758 | 73429312 ~ 73429589 (-) |
| G1580794 | NA | non-coding | upstream | 1845 | 73430399 ~ 73430609 (-) |
| G1580798 | NA | non-coding | upstream | 15716 | 73444270 ~ 73448580 (-) |
| G1580801 | NA | non-coding | upstream | 21011 | 73449565 ~ 73449790 (-) |
| G1580820 | NA | non-coding | upstream | 26101 | 73454655 ~ 73455587 (-) |
| G1580625 | NA | other | downstream | 379409 | 73047833 ~ 73048686 (-) |
| G1579954 | NA | other | downstream | 1213306 | 72214174 ~ 72214789 (-) |
| G1579715 | NA | other | downstream | 1789963 | 71636487 ~ 71638132 (-) |
| G1579672 | NA | other | downstream | 1909626 | 71517869 ~ 71518469 (-) |
| G1580844 | NA | other | upstream | 96728 | 73525282 ~ 73525595 (-) |
| G1581344 | LOC106589111 | other | upstream | 728751 | 74157305 ~ 74157747 (-) |
| G1581465 | NA | other | upstream | 878224 | 74306778 ~ 74307678 (-) |
| G1581622 | NA | other | upstream | 1018042 | 74446596 ~ 74446989 (-) |
