Gene
RNA
| Item | Value |
|---|---|
| gene id | G1581077 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 73597355 ~ 73598516 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106916242 isoform X10 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1809708 | True | 519 | lncRNA | 0.42 | 2 | 73597355 | 73598516 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496758 | LOC106530873 | coding | downstream | 152193 | 73433715 ~ 73445162 (-) |
| LOC110496760 | NA | coding | downstream | 203657 | 73388761 ~ 73393698 (-) |
| LOC110517586 | LOC106589098 | coding | downstream | 233624 | 73304371 ~ 73363731 (-) |
| LOC110496752 | LOC106589094 | coding | downstream | 465916 | 73006005 ~ 73131439 (-) |
| LOC110489356 | LOC106589108 | coding | upstream | 156848 | 73755364 ~ 73763523 (-) |
| LOC110496905 | LOC106593151 | coding | upstream | 223492 | 73822008 ~ 74115567 (-) |
| LOC110487813 | NA | coding | upstream | 710966 | 74309482 ~ 74331094 (-) |
| mc5ra | LOC106589114 | coding | upstream | 819619 | 74418135 ~ 74437944 (-) |
| ldlrad4a | LOC106589113 | coding | upstream | 897866 | 74496382 ~ 74540849 (-) |
| G1581104 | NA | non-coding | downstream | 9727 | 73586882 ~ 73587628 (-) |
| G1580849 | NA | non-coding | downstream | 64183 | 73532972 ~ 73533172 (-) |
| G1580847 | NA | non-coding | downstream | 66308 | 73530652 ~ 73531047 (-) |
| G1580842 | NA | non-coding | downstream | 72880 | 73524228 ~ 73524475 (-) |
| G1580841 | NA | non-coding | downstream | 73702 | 73523370 ~ 73523653 (-) |
| G1581115 | NA | non-coding | upstream | 10092 | 73608608 ~ 73610323 (-) |
| G1581161 | NA | non-coding | upstream | 105708 | 73704224 ~ 73705331 (-) |
| G1581172 | NA | non-coding | upstream | 123924 | 73722440 ~ 73722951 (-) |
| G1581173 | NA | non-coding | upstream | 124527 | 73723043 ~ 73723990 (-) |
| G1581177 | NA | non-coding | upstream | 137411 | 73735927 ~ 73736385 (-) |
| G1580844 | NA | other | downstream | 71760 | 73525282 ~ 73525595 (-) |
| G1580625 | NA | other | downstream | 548669 | 73047833 ~ 73048686 (-) |
| G1579954 | NA | other | downstream | 1382566 | 72214174 ~ 72214789 (-) |
| G1579715 | NA | other | downstream | 1959223 | 71636487 ~ 71638132 (-) |
| G1581344 | LOC106589111 | other | upstream | 558789 | 74157305 ~ 74157747 (-) |
| G1581465 | NA | other | upstream | 708262 | 74306778 ~ 74307678 (-) |
| G1581622 | NA | other | upstream | 848080 | 74446596 ~ 74446989 (-) |
| G1581629 | NA | other | upstream | 859166 | 74457682 ~ 74458316 (-) |
