G1580852


Basic Information

Item Value
gene id G1580852
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 73722439 ~ 73722964 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1809444
ttggagtccacctgtggtaaatacaattgattggacatgatttggaaaggcacacacctgtctatataaggtcccacagttgacagagcatgtcagagcaaaaaccaagccatgaggtcgaaggaattgtccgtacagccacgagacaggattgtgtcgaggcagagatctggggaagggtaccaaaacatttctgcggcattgaaggtcTTCAAGAAcgctgtggcctccatcattcttaaatggaagaagtttggaaccaccaagactcttcctagagctggccacccagccaaactgagcaatcgggggagaagggccttggtcaggggagaagggccttgaccaagaacctgatggtcactctgacagagctccagagctcctctgtggagatgggagaaccttccagaaggacaaccatctctgcagcactccaccaatcaggcctttatggtcgagtggccagacagaatccacttgtcagtaaaaggcacatgaccagCCCGCTGGGAGTTTGCtgaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1809444 True 526 lncRNA 0.51 1 73722439 73722964
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110496757 LOC102790862 coding upstream 786 73533349 ~ 73721653 (+)
LOC110496759 nupl2 coding upstream 303925 73396445 ~ 73418514 (+)
LOC110496903 LOC106570720 coding upstream 441188 73201799 ~ 73281251 (+)
sync sync coding upstream 547519 73130799 ~ 73174920 (+)
yars1 yars coding upstream 705596 73005896 ~ 73016843 (+)
LOC118941018 NA coding downstream 60470 73783434 ~ 73784213 (+)
LOC110496904 fuca1 coding downstream 66554 73789518 ~ 73801888 (+)
LOC110496761 LOC106589111 coding downstream 424435 74147399 ~ 74159321 (+)
znf706 LOC106589117 coding downstream 847351 74570315 ~ 74576877 (+)
G1580918 NA non-coding upstream 15219 73658965 ~ 73707220 (+)
G1580930 NA non-coding upstream 17359 73704131 ~ 73705080 (+)
G1580922 NA non-coding upstream 53725 73666945 ~ 73668714 (+)
G1580912 NA non-coding upstream 80606 73641582 ~ 73641833 (+)
G1580904 NA non-coding upstream 109022 73612707 ~ 73613417 (+)
G1580851 NA non-coding downstream 805 73723769 ~ 73727647 (+)
G1580937 NA non-coding downstream 7977 73730941 ~ 73731160 (+)
G1580943 NA non-coding downstream 41040 73764004 ~ 73764279 (+)
G1580944 NA non-coding downstream 41953 73764917 ~ 73765166 (+)
G1580946 NA non-coding downstream 43677 73766641 ~ 73780133 (+)
G1580898 NA other upstream 123892 73596810 ~ 73598547 (+)
G1580586 NA other upstream 378602 73343297 ~ 73343837 (+)
G1580222 NA other upstream 1125768 72596064 ~ 72596671 (+)
G1579986 NA other upstream 1459219 72262416 ~ 72263220 (+)

Expression

G1580852 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 80.
End of interactive chart.

G1580852 Expression in each Bioproject

Bar chart with 21 bars.
G1580852 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 600.
End of interactive chart.

Co-expression Network