G1580851


Basic Information

Item Value
gene id G1580851
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 73723769 ~ 73727647 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1809443
gaaaaagtcaaggggtctgaatactttccgaatgcactgtatgtgtcaggtctgacattttttttgtttgtatatTTCTTACTCCTTAGTTGCAAGTTAAggctgtgtgtttggtgtgtacCATTTGTTTTACAGGTAGCCTACAGTACCTGCCTTTTTTCTGAAATCTTTCTCGTCCTCATTCTGCCTCTGTTCATACCTTTGCCCCAGAGTTTTACCCTTTAACTCCCGGCCATATTACAGTACGGACAGTACTAGCCTTCCTCTGCACCACGTCACTCCCATCTGAACTATCTATGTCACTGTGTCACATTATTTCCTATTAAGTTATAATTTAAGGTAGAGAAGTCTATTACGTTATAGTTTAAGGTAGAGAAGTCTATTACGTTATAGTTTAAGGTAGAGAAGTCTATTACGTTATAGTTTAAGGTAGAGAAGTCTATTACGTTATAGTTTAAGGAAGAGAAGTCTATTACGTTATAGTTTAAGGTAGAGAAGTCTATTACGTTATAGTTTAAGGTAGAGAAGTCTATTAAGTTATAGTTTAAGGTAGAGAAGTCTATTAAGTTATAGTTTAAGGTAGAGAAGTCTATTACGTTATAGTTTAAGGAAGAGAAGTCGTCTCATGAGGATTTTCATTGGTGTTGTTGTACTTTTTTTTATCTTCATTTAAACAAAATGGTTTTACTTCACTGTGTAATTGTTTAATTTATGCAGATATTCACAACCCTTTACCACAACGACCGTAGTGTGATTGACTGGCTAGAGAACCAACCCAACCCTGCTATAATTCTAAGAGTTCCTAGGTGTTACCCTCTGGGAGCTGGTCTTCAGGTCACAGACACGGCTACATGGTTCATGGTTCATCAACAGGACAGCTGCCATATAACTGTCTTTCTTTTATCGTCAGTCCCTTCCAAGGATTCATCGTTCCTGTGTGAAGTCCCGTAACTCAGTCCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACCCAGTCTGTAACTCAGTCTGTAACTCAGTTTGTAACTCAGTCTGTAACCCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACCCAGTCTGTAACTCAGTCTGTAACTCAGTTTGTAACTCAGTCTGTAACTCAGTTTGTAACTCAGTTTGTAACTCAGTCTGTAACTCAGTTTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACCCAGTCTGTAACTCAGTTTGTAACTCAGTCTGTAACTCAGTCTGTAACCCAGTCTGTAACTCAGTCTGTAACTCAGTTTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACCCAGTCTGTAACTCAGTCTGTAACTCAGTTTGTAACTCAGTCTTTAACTCAGTTTGTAACTCAGTCTGTAACCCAGTCTGTAACCCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTTTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTTTGTAACTCAGTCTGTAACCCAGTCTGTAACTCAGTTTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACCCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACCCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTTTGTAACCCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACCCAGTTTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACCCAGTCTGTAACTCAGTATGTAACTCAGTCTGTAACCCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACCCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTTTGTAACTCAGTCTGTAACCCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTTTGTAACTCAGTCTGTAACTCAGTTTGTAACTCAGTCTGTAACCCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTTTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACCCAGTCTGTAACCCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACCCAGTCTGTAACTCAGTCTGTAACTCAGTCTGTAACCCAGTCTGTAACCCAGTCTGTAACTCAGTCTGTAAGGTAGCACCTTATTTCTAATTTCTTGAAGCTTGACATTGTTCTCTTGAAAAAGAAGAAGAACATAACTAAGGAAAAGGATAGAAGAAGAACATAACTAAGGAAAAggatagaagaagaagaacataaCTAAGGAAAAggatagaagaagaagaacataaCTAAGGAAAAGGATAGAAGAAGAACATAACTAAGGAAAAtgatagaagaagaagaacataaCTAAGGAAAAggatagaagaagaagaacataaCTAAGGAAAAggatagaagaagaagaacataaCTAAGGAAAAGGATAGAAGAAGAACATAACTAAGGAAAAggatagaagaagaagaacataaCTAAGGAAAAggatagaagaagaagaacataaCTAAGGAAAAGGATAGAAGAAGAACATAACTAAGGAAAAtgatagaagaagaagaacataaCTAAGGAAAAggatagaagaagaagaacataaCTAAGGAAAAggatagaagaagaagaacataaCTAAGGAAAAGGATAGAAGAAGAACATAACTAAGGAAAAggatagaagaagaagaacataaCTAAGGAAAAggatagaagaagaagaacataaCTAAGGAAAAGGAAAGGATTTGATCTCAGAACTGTTTATACGTAGAAGAAGAAAGAAGTTCTCTGGACACTTCCCACTGGGCAGACTCTGGACACTTCCCACTGGGCAGACTCTGGACACTTCCCACTGGGCAGACTCTGGACACTTCCCACTGGGCAGACTCTGGACACTTCCCACTGGGCAGACTCTGGACACTTCCCACTAGGCAGACTCTGGACACTTCCCACTGGGCAGACTCTGGACACTTCCCACTGGGCAGACTCTGGACACTTCCCACTGGGCAGACTCTGGACACTTCCCACTGGGCAGTCTCTGGACACTTTCCACTGGGCAGACTCTGGACACTTCCCACTGGGCAGACTCTGaacacttcccactgggcacggacgtctattccacgttgattTAATGTCATTttattgaaatgatgtggaaacaacgttgattcaaccagtgggtTGTTTTAGACAGAACCAAACAAATACTATTGTGTTTTACTGTTGGTTCTGGTTGGTTCTGTTGGTTCTGGTTGGTTCTGTTGGTTCTGTTGGTTCTGTGTGTTTCTGGTTGGTTCTGTTGGTTCTGTGCTTGTTACTTCAAATGGACTTGGGGATATTTGGGAATATTTAAACTAtcatgtaaccagtgaactggaCACTAAAACCATGCTGTTTGGATTAAATGTATGTCACTCCTTTCACCTGAAACGCTATGTATACACACCCTGCAATAAAACGACATTGTTCAG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106601750

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1809443 True 3819 lncRNA 0.40 2 73723769 73727647
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110496757 LOC102790862 coding upstream 2116 73533349 ~ 73721653 (+)
LOC110496759 nupl2 coding upstream 305255 73396445 ~ 73418514 (+)
LOC110496903 LOC106570720 coding upstream 442518 73201799 ~ 73281251 (+)
sync sync coding upstream 548849 73130799 ~ 73174920 (+)
yars1 yars coding upstream 706926 73005896 ~ 73016843 (+)
LOC118941018 NA coding downstream 55787 73783434 ~ 73784213 (+)
LOC110496904 fuca1 coding downstream 61871 73789518 ~ 73801888 (+)
LOC110496761 LOC106589111 coding downstream 419752 74147399 ~ 74159321 (+)
znf706 LOC106589117 coding downstream 842668 74570315 ~ 74576877 (+)
G1580852 NA non-coding upstream 805 73722439 ~ 73722964 (+)
G1580918 NA non-coding upstream 16549 73658965 ~ 73707220 (+)
G1580930 NA non-coding upstream 18689 73704131 ~ 73705080 (+)
G1580922 NA non-coding upstream 55055 73666945 ~ 73668714 (+)
G1580912 NA non-coding upstream 81936 73641582 ~ 73641833 (+)
G1580937 NA non-coding downstream 3294 73730941 ~ 73731160 (+)
G1580943 NA non-coding downstream 36357 73764004 ~ 73764279 (+)
G1580944 NA non-coding downstream 37270 73764917 ~ 73765166 (+)
G1580946 NA non-coding downstream 38994 73766641 ~ 73780133 (+)
G1580960 NA non-coding downstream 110924 73838571 ~ 73839512 (+)
G1580898 NA other upstream 125222 73596810 ~ 73598547 (+)
G1580586 NA other upstream 379932 73343297 ~ 73343837 (+)
G1580222 NA other upstream 1127098 72596064 ~ 72596671 (+)
G1579986 NA other upstream 1460549 72262416 ~ 72263220 (+)

Expression

G1580851 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 30.
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G1580851 Expression in each Bioproject

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G1580851 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network