G1581185


Basic Information

Item Value
gene id G1581185
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 73810121 ~ 73813306 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1809833
agactccatgGTTCACTCAACGGACAGGAAGCCTTTCTTTTCCACGACTCATTTAATTGccgttttcttcttcttctattttgttgtttttataCCCGACGATTTGTTTTATACACTGATGAGCTGAAAATCTGTTTTGTTTTCATATCAAATGAATGATCATGATGGTGGTTTTCATCTGTGTACTGATCTGTGTACTGATCtgtctactgactgactggcgcAAATAGCAATAGTGACGTCCCCATAGAAAAATAACACACGCCCCATTCGTTCATCGCACCAATGAGTACACAGATTCATGAAATCACCCTCCCCAATTGGATGAGACAAGAAGATGGGGGTGGAGCCAAATATGTGCCAACCAACCAATGGGGCAAGGGTGTTGCACAGTGAAAGTAGAACTATAAAATCATGTTTTTGTTTGATTGTGTTGTTTTATTtgtgttttaatttatttatatatcaAATACACTGTATATTAAGAGATAGATGTGTAAAGCTACACGTCTAGCTAGCCTAGCGCTGATCCCTGATAGATGTGTGGAGCTACACGTCTAGCTAGCCTAGCGCTGATCCCTGATAGATGTGTGGAGCTACACGTCTAGCTAGCCTAGCGCTGATCCCTGATAGATGTGTAAAGCTACACGTCTAGCTAGCCTAGCGCTGACCCCGATGTGTAAAGCTACACGTCTAGCTAGCCTAGCGCTGACCCCTGATGTGTAAAGCTACACGTCTAGCTAGCCTAGCGCTGACCCCTGATGTGTAAAGCTACACGTCTAGCTAGCCTAGCGCTGACCCCTGATGTGTAAAGCTACACGTCTAGCTAGCCTAGCGCTGATCCCTGAGAGATGTGTAAAGCTACACGTCTAGCTAGCCTAGCGCTGACCCCTGATGTGTAAAGCTACACGTCTAGCTAGCCTAGCGCTGATCCCTGATGTGTAAAGCTACACGTCTAGCTAGCCTAGCGCTGACCCCTGATGTGTAAAGCTACACGTCTAGCTAGCCTAGCGCTGATCCCTGAGAGATGGCACACTGTGAAGTGGTTTACCCAACACAGAATGTAACACGGTCCACCTTGTAAACATTTTC
>TU1809837
GGGGGTAACACTATGGGGGGTAACACTACTCAAGAGTGAGTTTGTAAAGTGAAGTCAAAATAAATCTGTCAATCTAGAAGAATCTCTTATTGCTACCACCGTAGCAGAGCAGAAGATTTGAACAAAGATGAGAAGACACATATTGGAACAAAAGTGAGTgattctctcattctccctctggTCTCCTTTGGTAGTTGCATGAGAAATTACAAAATGGACGGAAGGACAAAACGGAAGGATGGATAGTGACAAAAAGAAAGGGATAAAGACAAGAGGGCTGAAGACCAACATGGATATTGTAGCGACCTTAACcaaacacctagcaacctcatcaAGGGGTTGAGAACTCAGCGTAATAATGAAGGCGTTGGCCTCGACAGTCGCTGGATCCAAGGTCGCTTACAACATGTGATTTATATTCCACTCAGAACTCTTGGGTTTCTCTTTTATTTCCGTCGTCTCTCTCCGAGGAGACCTAACGAACTACTGTACTTAATCTAATGCAGACATTTCATTCGTATTATACTCTGTAATGTAGCAGGAAGAAGTCCCTTTGTTCTCCTCTCTTTAATATTTCTTTCTCACTTCTTTCTCTGGTGGTCATagtctcacagacagacagacagacagacagacagacaggcagacaggcagacagacagacagacagacagacagacagacagacagacagacagacaggcagacaggcagacaggcaggcagacagacagacagacagactccatgGTTCACTCAACGGACAGGAAGCCTTTCTTTTCCACGACTCATTTAATTGccgttttcttcttcttctattttgttgtttttataCCCGACGATTTGTTTTATACACTGATGAGCTGAAAATCTGTTTTGTTTTCATATCAAATGAATGATCATGATGGTGGTTTTCATCTGTGTACTGATCTGTGTACTGATCtgtctactgactgactggcgcAAATAGCAATAGTGACGTCCCCATAGAAAAATAACACACGCCCCATTCGTTCATCGCACCAATGAGTACACAGATTCATGAAATCACCCTCCCCAATTGGATGAGACAAGAAGATGGGGGTGGAGCCAAATATGTGCCAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1809833 False 1092 lncRNA 0.45 2 73810121 73811306
TU1809837 True 1106 lncRNA 0.43 2 73810941 73813306

Neighbor

gene id symbol gene type direction distance location
LOC110489356 LOC106589108 coding downstream 46598 73755364 ~ 73763523 (-)
LOC110496758 LOC106530873 coding downstream 364959 73433715 ~ 73445162 (-)
LOC110496760 NA coding downstream 416423 73388761 ~ 73393698 (-)
LOC110517586 LOC106589098 coding downstream 446390 73304371 ~ 73363731 (-)
LOC118941220 NA coding downstream 728225 73079404 ~ 73081896 (-)
LOC110496905 LOC106593151 coding upstream 8702 73822008 ~ 74115567 (-)
LOC110487813 NA coding upstream 496176 74309482 ~ 74331094 (-)
mc5ra LOC106589114 coding upstream 604829 74418135 ~ 74437944 (-)
ldlrad4a LOC106589113 coding upstream 683076 74496382 ~ 74540849 (-)
G1581186 fuca1 non-coding downstream 20007 73787827 ~ 73790114 (-)
G1581181 NA non-coding downstream 50873 73757979 ~ 73759248 (-)
G1581177 NA non-coding downstream 73736 73735927 ~ 73736385 (-)
G1581173 NA non-coding downstream 86131 73723043 ~ 73723990 (-)
G1581250 NA non-coding upstream 148322 73961628 ~ 73962196 (-)
G1581257 NA non-coding upstream 165441 73978747 ~ 73979360 (-)
G1581262 NA non-coding upstream 174687 73987993 ~ 73988302 (-)
G1581275 NA non-coding upstream 198005 74011311 ~ 74012603 (-)
G1581298 NA non-coding upstream 236386 74049692 ~ 74052774 (-)
G1580844 NA other downstream 284526 73525282 ~ 73525595 (-)
G1580625 NA other downstream 761435 73047833 ~ 73048686 (-)
LOC110496752 LOC106589094 other downstream 793337 73006005 ~ 73131439 (-)
G1579954 NA other downstream 1595332 72214174 ~ 72214789 (-)
G1579715 NA other downstream 2171989 71636487 ~ 71638132 (-)
G1581344 LOC106589111 other upstream 343999 74157305 ~ 74157747 (-)
G1581465 NA other upstream 493472 74306778 ~ 74307678 (-)
G1581622 NA other upstream 633290 74446596 ~ 74446989 (-)
G1581629 NA other upstream 644376 74457682 ~ 74458316 (-)

Expression


Co-expression Network