Gene
RNA
| Item | Value |
|---|---|
| gene id | G1581298 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 74049692 ~ 74052774 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1809976 | True | 1013 | lncRNA | 0.55 | 2 | 74049692 | 74052774 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489356 | LOC106589108 | coding | downstream | 286169 | 73755364 ~ 73763523 (-) |
| LOC110496758 | LOC106530873 | coding | downstream | 604530 | 73433715 ~ 73445162 (-) |
| LOC110496760 | NA | coding | downstream | 655994 | 73388761 ~ 73393698 (-) |
| LOC110517586 | LOC106589098 | coding | downstream | 685961 | 73304371 ~ 73363731 (-) |
| LOC118941220 | NA | coding | downstream | 967796 | 73079404 ~ 73081896 (-) |
| LOC110487813 | NA | coding | upstream | 256708 | 74309482 ~ 74331094 (-) |
| mc5ra | LOC106589114 | coding | upstream | 365361 | 74418135 ~ 74437944 (-) |
| ldlrad4a | LOC106589113 | coding | upstream | 443608 | 74496382 ~ 74540849 (-) |
| G1581275 | NA | non-coding | downstream | 37089 | 74011311 ~ 74012603 (-) |
| G1581262 | NA | non-coding | downstream | 61390 | 73987993 ~ 73988302 (-) |
| G1581257 | NA | non-coding | downstream | 70332 | 73978747 ~ 73979360 (-) |
| G1581250 | NA | non-coding | downstream | 87496 | 73961628 ~ 73962196 (-) |
| G1581185 | NA | non-coding | downstream | 236386 | 73810121 ~ 73813306 (-) |
| G1581313 | NA | non-coding | upstream | 33818 | 74086592 ~ 74087015 (-) |
| G1581332 | NA | non-coding | upstream | 74307 | 74127081 ~ 74127956 (-) |
| G1581346 | NA | non-coding | upstream | 106991 | 74159765 ~ 74160167 (-) |
| G1581360 | NA | non-coding | upstream | 133594 | 74186368 ~ 74186660 (-) |
| G1581363 | NA | non-coding | upstream | 138234 | 74191008 ~ 74191226 (-) |
| LOC110496905 | LOC106593151 | other | downstream | 216488 | 73822008 ~ 74115567 (-) |
| G1580844 | NA | other | downstream | 524097 | 73525282 ~ 73525595 (-) |
| G1580625 | NA | other | downstream | 1001006 | 73047833 ~ 73048686 (-) |
| LOC110496752 | LOC106589094 | other | downstream | 1032908 | 73006005 ~ 73131439 (-) |
| G1579954 | NA | other | downstream | 1834903 | 72214174 ~ 72214789 (-) |
| G1581344 | LOC106589111 | other | upstream | 104531 | 74157305 ~ 74157747 (-) |
| G1581465 | NA | other | upstream | 254004 | 74306778 ~ 74307678 (-) |
| G1581622 | NA | other | upstream | 393822 | 74446596 ~ 74446989 (-) |
| G1581629 | NA | other | upstream | 404908 | 74457682 ~ 74458316 (-) |
| G1581737 | NA | other | upstream | 469384 | 74522158 ~ 74532080 (-) |
