G1581447



Basic Information


Item Value
gene id G1581447
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 74292745 ~ 74298979 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1810145
gtgctacggatgggtgttgccatcgtgaccagtgaactgagataaggcggagctttacctagcatggacttgtagatgacctggagccagtgggtctggcgacgaatatgtagcgagggccagccgactagcgcatacaagttgcagtggtgggtggtataaggtgctttagtgacaaaacggatggcactgtgataaactgcatccagtttgctgagtagagtgttggaagcaattttgtagatgacgtcgccgaagtcgaggatcggtaggatagtcagttttactagggtaagtttggcggcgtgagtgaaggcatacataacccacataggcttcaggttgaatttaggggtgcaggcaatgtattccta

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1810145 True 374 lncRNA 0.50 2 74292745 74298979

Neighbor


gene id symbol gene type direction distance location
LOC110496905 LOC106593151 coding downstream 177178 73822008 ~ 74115567 (-)
LOC110489356 LOC106589108 coding downstream 529222 73755364 ~ 73763523 (-)
LOC110496758 LOC106530873 coding downstream 847583 73433715 ~ 73445162 (-)
LOC110496760 NA coding downstream 899047 73388761 ~ 73393698 (-)
LOC110517586 LOC106589098 coding downstream 929014 73304371 ~ 73363731 (-)
LOC110487813 NA coding upstream 10503 74309482 ~ 74331094 (-)
mc5ra LOC106589114 coding upstream 119156 74418135 ~ 74437944 (-)
ldlrad4a LOC106589113 coding upstream 197403 74496382 ~ 74540849 (-)
G1581363 NA non-coding downstream 101519 74191008 ~ 74191226 (-)
G1581360 NA non-coding downstream 106085 74186368 ~ 74186660 (-)
G1581346 NA non-coding downstream 132578 74159765 ~ 74160167 (-)
G1581332 NA non-coding downstream 164789 74127081 ~ 74127956 (-)
G1581313 NA non-coding downstream 205730 74086592 ~ 74087015 (-)
G1581454 NA non-coding upstream 911 74299890 ~ 74300095 (-)
G1581461 NA non-coding upstream 4768 74303747 ~ 74303965 (-)
G1581498 NA non-coding upstream 9527 74308506 ~ 74309079 (-)
G1581522 NA non-coding upstream 59730 74358709 ~ 74359380 (-)
G1581627 NA non-coding upstream 156972 74455951 ~ 74456215 (-)
G1581344 LOC106589111 other downstream 134998 74157305 ~ 74157747 (-)
G1580844 NA other downstream 767150 73525282 ~ 73525595 (-)
G1580625 NA other downstream 1244059 73047833 ~ 73048686 (-)
LOC110496752 LOC106589094 other downstream 1275961 73006005 ~ 73131439 (-)
G1581465 NA other upstream 7799 74306778 ~ 74307678 (-)
G1581622 NA other upstream 147617 74446596 ~ 74446989 (-)
G1581629 NA other upstream 158703 74457682 ~ 74458316 (-)
G1581737 NA other upstream 223179 74522158 ~ 74532080 (-)
G1581793 NA other upstream 309509 74608488 ~ 74613460 (-)

Expression



Co-expression Network