LOC110516047 (LOC106602219)


Basic Information

Item Value
gene id LOC110516047
gene name LOC106602219
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 69812 ~ 72215 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036953887.1
cacaggttaactgtcataacatctactgtctatccacaggttaactgtcataacatctactctttatccacaggttaactgtcataacatatactgtctatccacaggttactTTGACACTATAACTGTTGTTTTGACAccactataatacagaatatctCTAAGAGATGGAAATCCTATGTGTTCCTGAGAAATGTATGGAACTCATCCAGTGATGTCATTATCAGTCACACAACCTGACAGTCTGTGACCATGACAACTGAGCACACATTGCGGTGTTCGACTTGGGGTCGAGAAGAGtgtgagaaagacagaaagggGGAACGTTAACTCTTTCTCAGCAGCATCACTTTTAGTTGCAAATGGCCCTGTGGTGAACCAAGGTAGAGCTGTGTACATCCTCATGCATGTGTACGTGTGCAGACATGAAGATCTGTATGACATGGTGCACGTATTAGCTTGGTGCTTCAGTGTGGGAACAGGATTTGTGGTCATGTCTGTTGTAAAGTCAGATCTCTGACCAGGTATAAGTAGATCTTGGCAGACCGTCTGCAAAAACACGTCCTGAAgctgaacaatacaaaacaacctcTATCGTGCTCCAGTCTGGTGCTGTTGAAGTCATGGGGAGAGACAACATCCTAACCTTTTCTGTGCTGTGTGTCTTCTCTGCTTGGACTCCGGGTGTGGATACAAAGACGGTCAGTCTCCCTCTGCATGATCCAAAATCCAACTTCCCCTTAGACATGGCTCCAGACTCTGTTGATGACTCCTACAAGGGCTGTGAGGAGAAGATGCTCAGGAAGGTGCATGACTATTACCTGAAAACGGAGAGACTAAAAAACAAAGATTTCAACCAGGCTTGGACCGATGCTGAGGCCCGTTACAAACCCAAACCGAAAAGAGCACTGTCTAAACTCTATTCCCTGGCAATCCAGGTGTATGTGACTGAATACTCCCAAATGTTCAAGTCATTCAACGAGGCCACTCGTACCCAAAAGAAGAGCTACAGCACAACATTCCAGTACCACTCCCTGCACTTCCTTCTGACCAATGCTTTACGAATCCTGAACAAGAAAAATAAGCGTTTTCAAACCTTCCGAGGAACCAACGTGTCTTTCCACGGAGTCCGAAATACTGAAATGCGATTCGGACAGTTCACGTCGAGCTCTTTAGACAAGAAAATCACTAAACACTTTGGAAATCGCTCCTGTTTTGAGATCACCACTTACCTTGGTGCCCCACTGGGGGAGTACGCATCTCAGATGGCTCATGAGAAGGAGGTGCTGATTCCTCCCTACGAGGTGTTCAGAATTACAGAGGTGCTGAAGAGAACAGACAAGAAAGACCTCTGGTGTGACGTCGTCTACAAACTGCAGAGTACTAAGAAAGGAAAAAGTGACCTGAAATGCCAGATGGTTGGACCACTCCAAGGAGAGTAAAATCAAAACAGCAACACAGCTGTTCCGCTTTCAGTTAAATATGAAATGCAGTTTTTAGTGCAACACCTGGCTTCCCCATCCACCATCGCTCCTCCCACaaatacagaaaatacagaaaacATTAGCGTAGCTTTTCCTACTTTCAGATTGTCAGATCTGTCCTGTTGTAAATGTTTCCCACATTGTTTGCTTAGATTGTTAACCTTTCTTCTGCCAGTGAATTGGCATTTGTTGTCATGTGCACTGCAGCTTTTGCTAAAAACCTATAATGAAAAGCATTGAGCAATATTACATCTCCTGTCCAATTTATCCACTACCTACACATCCATTATAAAGAGATGAATTTCATCTCACTTGaagacaatgtgtttgttctcAGGTTATAATTACAATGGGCTACAAAGATACTCCGATTTAAATAAAGAAATAGCCAAAGATAACCTGAAGCTTCAATCATCCCATCTGAGTGAGATTGTTGATAATGTGGTCGTTCTTCACCCATTATTCAACGTACAGTAGTTGTACAAAGTAATGACACCGAGTCATGGCTTTGAAATTAATTGT

Function

NR:

description
ecto-ADP-ribosyltransferase 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036953887.1 True 2006 mRNA 0.43 3 69812 72215

Neighbor

gene id symbol gene type direction distance location
LOC118941385 LOC106610450 coding upstream 7621 60866 ~ 62191 (+)
LOC110516050 nar5 coding upstream 17993 48513 ~ 51819 (+)
LOC118941529 LOC106610451 coding upstream 27757 25625 ~ 42055 (+)
LOC118941384 NA coding downstream 16347 88562 ~ 93659 (+)
LOC118941381 LOC106602212 coding downstream 53535 125750 ~ 133616 (+)
LOC110534579 LOC106602208 coding downstream 674632 746847 ~ 763889 (+)
LOC118941386 LOC106602222 coding downstream 691782 763997 ~ 783076 (+)
LOC110518435 LOC106602206 coding downstream 711356 783571 ~ 794371 (+)
G1581846 NA non-coding downstream 44035 116250 ~ 116484 (+)
G1581849 LOC106602211 non-coding downstream 51609 123824 ~ 124486 (+)
G1581905 NA non-coding downstream 70137 142352 ~ 142974 (+)
G1581911 NA non-coding downstream 382729 454944 ~ 455227 (+)
G1581929 NA non-coding downstream 424424 496639 ~ 496861 (+)
G1582090 LOC106602215 other downstream 738030 810245 ~ 958446 (+)
LOC110510959 LOC106602231 other downstream 1489290 1400041 ~ 1564792 (+)
LOC118941396 LOC106602234 other downstream 1509876 1580873 ~ 1620973 (+)
G1583003 NA other downstream 2126713 2198928 ~ 2200873 (+)
LOC110518136 LOC106592283 other downstream 2724888 2770293 ~ 2811692 (+)

Expression


Co-expression Network