LOC110518152


Basic Information

Item Value
gene id LOC110518152
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 898552 ~ 901052 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036953868.1
CACACTGTATCTCTTTAGTATCCTTATAGAAGCATAGaaactacttctgctactactctCACACAGTGCTtgagacagagtgacagatcTTCACTGCAAACATGAACAGCAAAGTTTCTCAGTCTGGAATCCAACAGCATACACAAAATGGGGAGATCCGCATTGTTCTGGTCGGGAAGACAGGAGCTGGGAAAAGTGTTGCAGGAAACATCATTCTAGGGGAAAAAGCTTTCCCATCAAAAATCTCCTCTATTTCTCAGACAAAAAACTGTCACAAGAGAAGAGGGAAGGTGGGTGAGCAAAGTGTAGCTGTTATTGACACCCCAGGTTTGTTTGATACTTCATTGTCCAATGAAGAGTCACTGAAAAAGATTGCTGAATGCATCTCTTTGTCTGCACCTGGTCCCCATGTGTTCCTGATTGTGATCCAGCTGGGAAGATTCACTGAAGAGGGGCAGAAAACTGTGGAGATGATTAAGACATTATTTGGGGATGAAGCATCCAAATACACCATGGTTCTCTTCACACATGGAGACTTTCttcatggtgatgatgatgatgatgatgatgtaacaATTGCACAGTTCCTGCTTGGAAATCCACATCTGGATAGTGTTATTTCCCAATGCAATGGGAGATATCATGTCTTCAACAAGAAAGATAAGAATCGCTCCCAGGTCACTGAGCTGCTTGAGAAGATCAAGACGATGGTGAAGATGAATGGAGGAAGCCACTACACCACTGATATGTTCCAGGAGGCTGAGAGAGCGATTGAAGAGGAGAAGAACAGGATCctgagagagaatgaagagaagatacgcagagaggaggagaaactgAAGAAAGAAAAAATGATCCAAGAGGCTCGGGAAAAAGAGCTTAAAGAGAAGAATGAGAGGATCCTGAGAGAGAACGAAGAGCAGAAACGCAGACAGAATGAACTGAAGCAAGATACACAAGAGGCTCAGGAGAAAGATtttaaagaggagaagaagagaatccagagagagaaggaagagcagAGACTCAGGGAGGAGGAACTGGAGAAACTGAAACTGGAAAACGAGGCTAAAGATAAAGAAATAAAGGAGTTGAGGGAAAAATATGAAAGGGAGGCAAGAGAGAGAGCTGAAGGAAGAAATGGCTTTCTATATAGTTTTATTAAAAAAGCTGCTGAAGTGTGGAAAACAGCAGTAAAAGATAGGTGCAGTACACAATGAAAATCTGAAACAATGCTGTTCAAGAGTCCCGAGCTTAGTCACATTGAATGCATTCATATACAGTGTACACTGTTGCCAttctactgttatagcctgtaACTATAGCATTGACTTCTATAGATGTATATTCTATAGCTTACATAAAGATTTATGACATTTATCCTGGCTCTGCTGTGTCTGTGATTTGTTTCCATTTATGTCAATAGTAAACATTATGTAATGACAATTTAAGACAAATACTAGACAACATTGAATGTAATCTATTGTTTCATTGATATTCAGTGAGGATATTTTCTTAAAATAACACAAATAATCATCATGACAGTTTATTAAAGCTGGTAATTAGCTACGTATGTGATTTTAGGGTAGCTTTCATGCATTGGCATTATAAATCAAATATGTtttaatcaacaacaaaaaataaaaaaacgtattCATGTTGTGCATAACA

Function

NR:

description
GTPase IMAP family member 7-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036953868.1 True 1671 mRNA 0.39 2 898552 901052

Neighbor

gene id symbol gene type direction distance location
LOC110515399 LOC106602215 coding upstream 28943 868005 ~ 869609 (+)
LOC110514371 LOC106602218 coding upstream 40411 850675 ~ 858141 (+)
LOC110534574 LOC106602215 coding upstream 75998 820911 ~ 822554 (+)
trnal-cag-27 NA coding upstream 101460 795780 ~ 797202 (+)
LOC110518435 LOC106602206 coding upstream 104181 783571 ~ 794371 (+)
LOC110515221 LOC106602215 coding downstream 17833 918885 ~ 927203 (+)
LOC110534577 LOC106602215 coding downstream 48174 949226 ~ 960377 (+)
LOC110510679 NA coding downstream 105764 1006816 ~ 1009333 (+)
LOC118936295 LOC106610443 coding downstream 197831 1098883 ~ 1117505 (+)
LOC118941388 LOC106610446 coding downstream 262281 1163333 ~ 1166048 (+)
G1582103 NA non-coding upstream 6965 843867 ~ 891587 (+)
G1582102 NA non-coding upstream 55570 842263 ~ 842982 (+)
G1582101 NA non-coding upstream 56419 840785 ~ 842133 (+)
G1582038 NA non-coding upstream 206918 691415 ~ 691634 (+)
G1582127 NA non-coding downstream 34154 935206 ~ 935588 (+)
G1582157 NA non-coding downstream 120009 1021061 ~ 1021393 (+)
G1582171 NA non-coding downstream 147076 1048128 ~ 1048635 (+)
G1582174 LOC106610441 non-coding downstream 154746 1055798 ~ 1056944 (+)
G1582177 NA non-coding downstream 162577 1063629 ~ 1063840 (+)
LOC110516050 nar5 other upstream 847361 48513 ~ 51819 (+)
LOC110510959 LOC106602231 other downstream 660453 1400041 ~ 1564792 (+)
LOC118941396 LOC106602234 other downstream 681039 1580873 ~ 1620973 (+)
G1583003 NA other downstream 1297876 2198928 ~ 2200873 (+)
LOC110518136 LOC106592283 other downstream 1896051 2770293 ~ 2811692 (+)
G1583215 NA other downstream 1912822 2765199 ~ 2815294 (+)

Expression


Co-expression Network